LOC728806 1290

Name: LOC728806	Sequence: fasta or formatted (563aa)		NCBI GI: 113426932
Description: PREDICTED: similar to N-ethylmaleimide-sensitive factor		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.3 58 4 C cysteine 1.6 9 1 D aspartate 4.6 26 1 E glutamate 7.3 41 3 F phenylalanine 3.9 22 1 G glycine 8.3 47 4 H histidine 2.0 11 1 I isoleucine 6.6 37 3 K lysine 6.6 37 2 L leucine 8.2 46 2 M methionine 3.0 17 1 N asparagine 4.4 25 2 P proline 5.2 29 2 Q glutamine 4.6 26 2 R arginine 6.4 36 2 S serine 6.0 34 2 T threonine 4.1 23 1 V valine 5.7 32 2 W tryptophan 0.4 2 1 Y tyrosine 0.9 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to N-ethylmaleimide-sensitive fa... NSF 0.861 vesicle-fusing ATPase LOC100294345 0.568 PREDICTED: similar to N-ethylmaleimide-sensitive fa... VCP 0.125 valosin-containing protein SPATA5 0.122 spermatogenesis associated 5 PSMC5 0.115 proteasome 26S ATPase subunit 5 PEX1 0.112 peroxin1 NVL 0.111 nuclear VCP-like isoform 2 NVL 0.111 nuclear VCP-like isoform 1 PSMC1 0.109 proteasome 26S ATPase subunit 1 PSMC6 0.105 proteasome 26S ATPase subunit 6 PSMC3 0.101 proteasome 26S ATPase subunit 3 LOC652826 0.100 PREDICTED: similar to proteasome 26S ATPase subunit ... PSMC4 0.100 proteasome 26S ATPase subunit 4 isoform 2 PSMC4 0.100 proteasome 26S ATPase subunit 4 isoform 1 ATAD2B 0.100 ATPase family, AAA domain containing 2B ATAD2 0.098 ATPase family, AAA domain containing 2 SPATA5L1 0.097 spermatogenesis associated 5-like 1 PEX6 0.097 peroxisomal biogenesis factor 6 PSMC2 0.097 proteasome 26S ATPase subunit 2 AFG3L2 0.096 AFG3 ATPase family gene 3-like 2 SPG7 0.083 spastic paraplegia 7 isoform 1 YME1L1 0.082 YME1-like 1 isoform 1 YME1L1 0.082 YME1-like 1 isoform 3 LOC345645 0.080 PREDICTED: similar to hCG2002932 LOC345645 0.080 PREDICTED: similar to hCG2002932 LOC345645 0.080 PREDICTED: hypothetical protein LOC345645 KATNAL1 0.075 katanin p60 subunit A-like 1 KATNAL1 0.075 katanin p60 subunit A-like 1 KATNA1 0.069 katanin p60 subunit A 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.