SCARF1 26220

Name: SCARF1	Sequence: fasta or formatted (830aa)		NCBI GI: 33598929
Description: scavenger receptor class F, member 1 isoform 1 precursor		Referenced in: Additional Membrane Functions
Other entries for this name: alt prot [744aa] scavenger receptor class F, member 1 isoform 5 precursor alt prot [569aa] scavenger receptor class F, member 1 isoform 3 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.8 73 3 C cysteine 9.6 80 3 D aspartate 3.3 27 2 E glutamate 7.6 63 3 F phenylalanine 2.4 20 2 G glycine 11.3 94 2 H histidine 2.7 22 2 I isoleucine 1.1 9 1 K lysine 2.8 23 2 L leucine 4.9 41 4 M methionine 0.6 5 1 N asparagine 1.3 11 2 P proline 11.2 93 3 Q glutamine 4.8 40 3 R arginine 6.5 54 2 S serine 9.6 80 2 T threonine 4.3 36 2 V valine 4.5 37 2 W tryptophan 2.0 17 2 Y tyrosine 0.6 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 scavenger receptor class F, member 1 isoform 1 precu... SCARF1 0.631 scavenger receptor class F, member 1 isoform 5 prec... SCARF1 0.630 scavenger receptor class F, member 1 isoform 3 precu... SCARF2 0.324 scavenger receptor class F, member 2 isoform 1 [Homo... SCARF2 0.323 scavenger receptor class F, member 2 isoform 2 [Homo... MEGF10 0.158 multiple EGF-like-domains 10 MEGF11 0.158 multiple EGF-like-domains 11 PEAR1 0.150 platelet endothelial aggregation receptor 1 MEGF6 0.148 EGF-like-domain, multiple 3 TNXB 0.072 tenascin XB isoform 1 precursor LAMB2 0.066 laminin, beta 2 precursor LAMB1 0.065 laminin, beta 1 precursor TNC 0.064 tenascin C precursor LAMA5 0.063 laminin alpha 5 NOTCH1 0.062 notch1 preproprotein NOTCH3 0.061 Notch homolog 3 LAMB4 0.061 laminin, beta 4 LAMA2 0.060 laminin alpha 2 subunit isoform b precursor LAMA2 0.060 laminin alpha 2 subunit isoform a precursor NOTCH2 0.060 notch 2 preproprotein LAMA1 0.058 laminin, alpha 1 precursor ODZ2 0.058 odz, odd Oz/ten-m homolog 2 NOTCH4 0.056 notch4 preproprotein ODZ4 0.056 odz, odd Oz/ten-m homolog 4 DLL4 0.054 delta-like 4 protein precursor VWDE 0.054 von Willebrand factor D and EGF domains JAG1 0.053 jagged 1 precursor ODZ3 0.052 odz, odd Oz/ten-m homolog 3 DLL1 0.051 delta-like 1 TIE1 0.051 tyrosine kinase with immunoglobulin-like and EGF-like... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.