Guide to the Human Genome
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Name: JAG2 Sequence: fasta or formatted (1238aa) NCBI GI: 21704277
Description:

jagged 2 isoform a precursor

Referenced in:

Notch Pathway

Other entries for this name:
alt prot [1200aa] jagged 2 isoform b precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         91           2
 C cysteine           10.5        130           2
 D aspartate           6.1         76           2
 E glutamate           5.7         71           2
 F phenylalanine       2.8         35           2
 G glycine            11.7        145           2
 H histidine           2.7         34           2
 I isoleucine          2.4         30           1
 K lysine              2.6         32           1
 L leucine             6.3         78           5
 M methionine          0.5          6           1
 N asparagine          4.8         59           2
 P proline             7.3         90           3
 Q glutamine           2.7         33           1
 R arginine            6.6         82           2
 S serine              6.1         75           2
 T threonine           4.0         50           2
 V valine              5.2         64           2
 W tryptophan          2.2         27           2
 Y tyrosine            2.4         30           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   jagged 2 isoform a precursor 
JAG2                  0.855   jagged 2 isoform b precursor 
JAG1                  0.521   jagged 1 precursor 
NOTCH1                0.184   notch1 preproprotein 
NOTCH2                0.177   notch 2 preproprotein 
NOTCH3                0.170   Notch homolog 3 
DLL1                  0.166   delta-like 1 
DLL4                  0.165   delta-like 4 protein precursor 
NOTCH4                0.160   notch4 preproprotein 
SNED1                 0.129   6720455I24Rik homolog 
EYS                   0.127   eyes shut homolog isoform 1 
CRB1                  0.102   crumbs homolog 1 precursor 
CRB2                  0.100   crumbs homolog 2 
MEGF6                 0.084   EGF-like-domain, multiple 3 
FBN2                  0.079   fibrillin 2 precursor 
MEGF10                0.076   multiple EGF-like-domains 10 
DNER                  0.074   delta-notch-like EGF repeat-containing transmembran...
MEGF11                0.073   multiple EGF-like-domains 11 
SVEP1                 0.073   polydom 
DLK2                  0.072   EGF-like-domain, multiple 9 
DLK2                  0.072   EGF-like-domain, multiple 9 
LTBP4                 0.071   latent transforming growth factor beta binding prot...
LTBP4                 0.071   latent transforming growth factor beta binding prot...
LTBP4                 0.071   latent transforming growth factor beta binding prot...
DLL3                  0.070   delta-like 3 protein isoform 1 precursor 
DLL3                  0.070   delta-like 3 protein isoform 2 precursor 
FBN3                  0.069   fibrillin 3 precursor 
TNC                   0.069   tenascin C precursor 
TNXB                  0.068   tenascin XB isoform 1 precursor 
SLIT1                 0.068   slit homolog 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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