SCARF1 26221

Name: SCARF1	Sequence: fasta or formatted (569aa)		NCBI GI: 33598931
Description: scavenger receptor class F, member 1 isoform 3 precursor		Referenced in: Additional Membrane Functions
Other entries for this name: alt prot [744aa] scavenger receptor class F, member 1 isoform 5 precursor alt prot [830aa] scavenger receptor class F, member 1 isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 38 3 C cysteine 13.9 79 3 D aspartate 3.3 19 1 E glutamate 4.7 27 1 F phenylalanine 1.8 10 2 G glycine 11.1 63 1 H histidine 3.3 19 1 I isoleucine 0.7 4 1 K lysine 2.1 12 2 L leucine 6.9 39 4 M methionine 0.7 4 1 N asparagine 1.2 7 2 P proline 11.1 63 2 Q glutamine 5.3 30 3 R arginine 7.0 40 2 S serine 8.3 47 3 T threonine 4.9 28 1 V valine 3.3 19 1 W tryptophan 3.3 19 2 Y tyrosine 0.4 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 scavenger receptor class F, member 1 isoform 3 precu... SCARF1 0.880 scavenger receptor class F, member 1 isoform 1 precu... SCARF1 0.590 scavenger receptor class F, member 1 isoform 5 prec... SCARF2 0.413 scavenger receptor class F, member 2 isoform 1 [Homo... SCARF2 0.410 scavenger receptor class F, member 2 isoform 2 [Homo... MEGF10 0.221 multiple EGF-like-domains 10 MEGF11 0.220 multiple EGF-like-domains 11 PEAR1 0.209 platelet endothelial aggregation receptor 1 MEGF6 0.207 EGF-like-domain, multiple 3 TNXB 0.100 tenascin XB isoform 1 precursor LAMB2 0.093 laminin, beta 2 precursor LAMB1 0.090 laminin, beta 1 precursor TNC 0.090 tenascin C precursor LAMA5 0.088 laminin alpha 5 NOTCH1 0.087 notch1 preproprotein NOTCH3 0.085 Notch homolog 3 LAMB4 0.085 laminin, beta 4 LAMA2 0.084 laminin alpha 2 subunit isoform b precursor LAMA2 0.084 laminin alpha 2 subunit isoform a precursor NOTCH2 0.083 notch 2 preproprotein LAMA1 0.080 laminin, alpha 1 precursor ODZ2 0.080 odz, odd Oz/ten-m homolog 2 NOTCH4 0.079 notch4 preproprotein ODZ4 0.079 odz, odd Oz/ten-m homolog 4 DLL4 0.075 delta-like 4 protein precursor VWDE 0.075 von Willebrand factor D and EGF domains JAG1 0.073 jagged 1 precursor ODZ3 0.073 odz, odd Oz/ten-m homolog 3 DLL1 0.071 delta-like 1 TIE1 0.071 tyrosine kinase with immunoglobulin-like and EGF-like... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.