Guide to the Human Genome
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Name: JAG2 Sequence: fasta or formatted (1200aa) NCBI GI: 21704279
Description:

jagged 2 isoform b precursor

Referenced in:

Notch Pathway

Other entries for this name:
alt prot [1238aa] jagged 2 isoform a precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         89           2
 C cysteine           10.3        124           2
 D aspartate           6.2         75           2
 E glutamate           5.8         69           2
 F phenylalanine       2.8         34           2
 G glycine            11.7        140           2
 H histidine           2.8         33           2
 I isoleucine          2.2         26           1
 K lysine              2.4         29           1
 L leucine             6.3         76           5
 M methionine          0.5          6           1
 N asparagine          4.5         54           2
 P proline             7.3         88           3
 Q glutamine           2.8         33           1
 R arginine            6.8         82           2
 S serine              6.2         74           2
 T threonine           4.2         50           2
 V valine              5.3         64           2
 W tryptophan          2.2         26           2
 Y tyrosine            2.3         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   jagged 2 isoform b precursor 
JAG2                  0.993   jagged 2 isoform a precursor 
JAG1                  0.505   jagged 1 precursor 
NOTCH1                0.176   notch1 preproprotein 
DLL1                  0.175   delta-like 1 
NOTCH2                0.168   notch 2 preproprotein 
NOTCH3                0.167   Notch homolog 3 
DLL4                  0.165   delta-like 4 protein precursor 
NOTCH4                0.156   notch4 preproprotein 
EYS                   0.132   eyes shut homolog isoform 1 
SNED1                 0.127   6720455I24Rik homolog 
CRB1                  0.103   crumbs homolog 1 precursor 
CRB2                  0.103   crumbs homolog 2 
DLK2                  0.081   EGF-like-domain, multiple 9 
DLK2                  0.081   EGF-like-domain, multiple 9 
FBN2                  0.078   fibrillin 2 precursor 
MEGF10                0.078   multiple EGF-like-domains 10 
TNC                   0.076   tenascin C precursor 
LTBP4                 0.075   latent transforming growth factor beta binding prot...
LTBP4                 0.075   latent transforming growth factor beta binding prot...
LTBP4                 0.075   latent transforming growth factor beta binding prot...
DNER                  0.075   delta-notch-like EGF repeat-containing transmembran...
SVEP1                 0.074   polydom 
MEGF6                 0.074   EGF-like-domain, multiple 3 
MEGF11                0.073   multiple EGF-like-domains 11 
DLL3                  0.071   delta-like 3 protein isoform 1 precursor 
DLL3                  0.071   delta-like 3 protein isoform 2 precursor 
TNXB                  0.070   tenascin XB isoform 1 precursor 
SLIT3                 0.069   slit homolog 3 
PEAR1                 0.069   platelet endothelial aggregation receptor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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