Guide to the Human Genome
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Name: DLL1 Sequence: fasta or formatted (723aa) NCBI GI: 110735443
Description:

delta-like 1

Referenced in:

Notch Pathway
PDZ Domain

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         43           2
 C cysteine            9.7         70           2
 D aspartate           6.2         45           2
 E glutamate           5.4         39           2
 F phenylalanine       3.5         25           2
 G glycine            11.2         81           3
 H histidine           2.6         19           2
 I isoleucine          2.2         16           2
 K lysine              4.4         32           2
 L leucine             6.2         45           3
 M methionine          0.6          4           1
 N asparagine          4.0         29           2
 P proline             6.9         50           3
 Q glutamine           3.2         23           2
 R arginine            5.4         39           1
 S serine              7.2         52           3
 T threonine           5.5         40           2
 V valine              5.3         38           3
 W tryptophan          1.1          8           1
 Y tyrosine            3.5         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   delta-like 1 
DLL4                  0.434   delta-like 4 protein precursor 
JAG1                  0.305   jagged 1 precursor 
JAG2                  0.295   jagged 2 isoform b precursor 
JAG2                  0.290   jagged 2 isoform a precursor 
DLL3                  0.202   delta-like 3 protein isoform 1 precursor 
DLL3                  0.202   delta-like 3 protein isoform 2 precursor 
NOTCH1                0.165   notch1 preproprotein 
NOTCH2                0.156   notch 2 preproprotein 
NOTCH3                0.155   Notch homolog 3 
CRB2                  0.139   crumbs homolog 2 
EYS                   0.135   eyes shut homolog isoform 1 
CRB1                  0.134   crumbs homolog 1 precursor 
SVEP1                 0.134   polydom 
NOTCH4                0.130   notch4 preproprotein 
SLIT1                 0.128   slit homolog 1 
DLK2                  0.127   EGF-like-domain, multiple 9 
DLK2                  0.127   EGF-like-domain, multiple 9 
DNER                  0.127   delta-notch-like EGF repeat-containing transmembran...
DLK1                  0.127   delta-like 1 homolog 
SNED1                 0.115   6720455I24Rik homolog 
SLIT2                 0.111   slit homolog 2 
SLIT3                 0.106   slit homolog 3 
VWDE                  0.088   von Willebrand factor D and EGF domains 
MEGF11                0.085   multiple EGF-like-domains 11 
CUBN                  0.083   cubilin 
EYS                   0.083   eyes shut homolog isoform 2 
EYS                   0.083   eyes shut homolog isoform 3 
FAT4                  0.082   FAT tumor suppressor homolog 4 
NOTCH2NL              0.081   Notch homolog 2 N-terminal like protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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