NOTCH1 4749

Name: NOTCH1	Sequence: fasta or formatted (2555aa)		NCBI GI: 148833508
Description: notch1 preproprotein		Referenced in: Neurons Notch Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 170 4 C cysteine 9.6 246 1 D aspartate 6.1 155 2 E glutamate 5.3 136 4 F phenylalanine 2.5 64 2 G glycine 10.1 257 4 H histidine 3.2 82 2 I isoleucine 2.2 56 1 K lysine 2.5 63 3 L leucine 7.3 187 2 M methionine 1.1 29 2 N asparagine 5.9 151 3 P proline 7.8 200 6 Q glutamine 4.7 121 4 R arginine 4.0 103 4 S serine 7.4 189 4 T threonine 5.5 141 2 V valine 4.9 124 4 W tryptophan 0.8 20 1 Y tyrosine 2.4 61 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 notch1 preproprotein NOTCH2 0.512 notch 2 preproprotein NOTCH3 0.361 Notch homolog 3 NOTCH4 0.223 notch4 preproprotein EYS 0.108 eyes shut homolog isoform 1 JAG1 0.088 jagged 1 precursor FBN1 0.087 fibrillin 1 precursor FBN2 0.087 fibrillin 2 precursor JAG2 0.085 jagged 2 isoform a precursor FBN3 0.084 fibrillin 3 precursor JAG2 0.082 jagged 2 isoform b precursor SNED1 0.079 6720455I24Rik homolog MEGF6 0.074 EGF-like-domain, multiple 3 CRB1 0.062 crumbs homolog 1 precursor CRB2 0.058 crumbs homolog 2 MEGF11 0.047 multiple EGF-like-domains 11 TNXB 0.046 tenascin XB isoform 1 precursor DLL1 0.046 delta-like 1 DNER 0.044 delta-notch-like EGF repeat-containing transmembran... SVEP1 0.044 polydom LTBP2 0.044 latent transforming growth factor beta binding protei... MEGF10 0.044 multiple EGF-like-domains 10 LTBP4 0.044 latent transforming growth factor beta binding prot... LTBP4 0.044 latent transforming growth factor beta binding prot... LTBP4 0.044 latent transforming growth factor beta binding prot... DLL4 0.042 delta-like 4 protein precursor PEAR1 0.037 platelet endothelial aggregation receptor 1 SLIT1 0.036 slit homolog 1 TNC 0.035 tenascin C precursor LTBP1 0.035 latent transforming growth factor beta binding prote... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.