TNXB 10221

Name: TNXB	Sequence: fasta or formatted (4242aa)		NCBI GI: 188528648
Description: tenascin XB isoform 1 precursor		Referenced in: Fibronectin Family
Other entries for this name: alt prot [673aa] tenascin XB isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.0 210 2 C cysteine 2.9 123 2 D aspartate 5.8 248 2 E glutamate 7.5 319 3 F phenylalanine 2.6 112 1 G glycine 11.4 485 3 H histidine 2.1 87 2 I isoleucine 1.5 62 2 K lysine 2.8 120 2 L leucine 7.8 332 3 M methionine 1.3 55 2 N asparagine 1.4 58 1 P proline 9.9 420 5 Q glutamine 4.2 180 2 R arginine 6.7 283 2 S serine 7.0 296 3 T threonine 7.4 316 3 V valine 8.6 366 2 W tryptophan 1.2 51 2 Y tyrosine 2.8 119 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tenascin XB isoform 1 precursor TNXB 0.154 tenascin XB isoform 2 TNC 0.104 tenascin C precursor TNR 0.057 tenascin R TNN 0.051 tenascin N FN1 0.035 fibronectin 1 isoform 1 preproprotein FN1 0.034 fibronectin 1 isoform 3 preproprotein FN1 0.033 fibronectin 1 isoform 4 preproprotein FN1 0.032 fibronectin 1 isoform 2 preproprotein FN1 0.032 fibronectin 1 isoform 6 preproprotein MEGF11 0.030 multiple EGF-like-domains 11 MEGF10 0.030 multiple EGF-like-domains 10 MEGF6 0.029 EGF-like-domain, multiple 3 FN1 0.029 fibronectin 1 isoform 5 preproprotein NOTCH1 0.029 notch1 preproprotein NOTCH3 0.028 Notch homolog 3 COL12A1 0.027 collagen, type XII, alpha 1 long isoform precursor [... PEAR1 0.027 platelet endothelial aggregation receptor 1 NOTCH2 0.026 notch 2 preproprotein NOTCH4 0.026 notch4 preproprotein ODZ2 0.024 odz, odd Oz/ten-m homolog 2 ODZ3 0.024 odz, odd Oz/ten-m homolog 3 JAG1 0.024 jagged 1 precursor SNED1 0.023 6720455I24Rik homolog JAG2 0.022 jagged 2 isoform a precursor ODZ4 0.022 odz, odd Oz/ten-m homolog 4 JAG2 0.021 jagged 2 isoform b precursor ODZ1 0.020 odz, odd Oz/ten-m homolog 1 isoform 3 ODZ1 0.020 odz, odd Oz/ten-m homolog 1 isoform 2 ODZ1 0.020 odz, odd Oz/ten-m homolog 1 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.