SCARF1 4068

Name: SCARF1	Sequence: fasta or formatted (744aa)		NCBI GI: 145309306
Description: scavenger receptor class F, member 1 isoform 5 precursor		Referenced in: Additional Membrane Functions
Other entries for this name: alt prot [830aa] scavenger receptor class F, member 1 isoform 1 precursor alt prot [569aa] scavenger receptor class F, member 1 isoform 3 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.4 70 3 C cysteine 8.7 65 3 D aspartate 3.0 22 2 E glutamate 7.9 59 3 F phenylalanine 2.4 18 2 G glycine 10.8 80 2 H histidine 2.7 20 2 I isoleucine 1.2 9 1 K lysine 3.1 23 2 L leucine 5.2 39 4 M methionine 0.7 5 1 N asparagine 1.1 8 1 P proline 11.0 82 3 Q glutamine 5.1 38 3 R arginine 7.1 53 2 S serine 9.7 72 2 T threonine 4.0 30 2 V valine 4.3 32 2 W tryptophan 2.0 15 2 Y tyrosine 0.5 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 scavenger receptor class F, member 1 isoform 5 prec... SCARF1 0.946 scavenger receptor class F, member 1 isoform 1 precu... SCARF1 0.477 scavenger receptor class F, member 1 isoform 3 precu... SCARF2 0.254 scavenger receptor class F, member 2 isoform 1 [Homo... SCARF2 0.254 scavenger receptor class F, member 2 isoform 2 [Homo... MEGF10 0.133 multiple EGF-like-domains 10 PEAR1 0.131 platelet endothelial aggregation receptor 1 MEGF11 0.128 multiple EGF-like-domains 11 MEGF6 0.123 EGF-like-domain, multiple 3 LAMA5 0.061 laminin alpha 5 TNXB 0.059 tenascin XB isoform 1 precursor ODZ2 0.059 odz, odd Oz/ten-m homolog 2 LAMB2 0.058 laminin, beta 2 precursor ODZ3 0.058 odz, odd Oz/ten-m homolog 3 TNC 0.058 tenascin C precursor ODZ4 0.056 odz, odd Oz/ten-m homolog 4 NOTCH1 0.056 notch1 preproprotein LAMB1 0.054 laminin, beta 1 precursor VWDE 0.053 von Willebrand factor D and EGF domains LAMA2 0.053 laminin alpha 2 subunit isoform b precursor LAMA2 0.053 laminin alpha 2 subunit isoform a precursor NOTCH3 0.052 Notch homolog 3 TIE1 0.052 tyrosine kinase with immunoglobulin-like and EGF-like... DLL4 0.051 delta-like 4 protein precursor USH2A 0.051 usherin isoform B USH2A 0.051 usherin isoform A LAMA1 0.050 laminin, alpha 1 precursor JAG1 0.049 jagged 1 precursor NOTCH4 0.049 notch4 preproprotein ODZ1 0.048 odz, odd Oz/ten-m homolog 1 isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.