UBQLN1 7002

Name: UBQLN1	Sequence: fasta or formatted (589aa)		NCBI GI: 16753203
Description: ubiquilin 1 isoform 1		Referenced in: Proteasome
Other entries for this name: alt prot [561aa] ubiquilin 1 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.7 51 4 C cysteine 0.0 0 0 D aspartate 2.4 14 1 E glutamate 5.1 30 2 F phenylalanine 2.7 16 1 G glycine 8.8 52 2 H histidine 1.2 7 1 I isoleucine 3.4 20 1 K lysine 1.9 11 1 L leucine 9.8 58 2 M methionine 5.6 33 2 N asparagine 7.1 42 2 P proline 7.5 44 2 Q glutamine 11.0 65 3 R arginine 3.2 19 2 S serine 10.9 64 3 T threonine 7.3 43 2 V valine 2.7 16 1 W tryptophan 0.2 1 1 Y tyrosine 0.5 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubiquilin 1 isoform 1 UBQLN1 0.937 ubiquilin 1 isoform 2 UBQLN2 0.766 ubiquilin 2 UBQLN4 0.588 ataxin-1 ubiquitin-like interacting protein UBQLN3 0.279 ubiquilin 3 UBQLNL 0.176 ubiquilin-like MLL2 0.025 myeloid/lymphoid or mixed-lineage leukemia 2 UBL7 0.022 ubiquitin-like 7 UBL7 0.022 ubiquitin-like 7 SP4 0.020 Sp4 transcription factor ZFHX4 0.020 zinc finger homeodomain 4 BAT3 0.019 HLA-B associated transcript-3 isoform a BAT3 0.017 HLA-B associated transcript-3 isoform b BAT3 0.017 HLA-B associated transcript-3 isoform b BAT3 0.017 HLA-B associated transcript-3 isoform b VPS37A 0.017 hepatocellular carcinoma related protein 1 isoform ... APC 0.017 adenomatous polyposis coli APC 0.017 adenomatous polyposis coli APC 0.017 adenomatous polyposis coli POU6F2 0.015 POU domain, class 6, transcription factor 2 LOC100293268 0.014 PREDICTED: hypothetical protein RPS27A 0.014 ubiquitin and ribosomal protein S27a precursor [Hom... RPS27A 0.014 ubiquitin and ribosomal protein S27a precursor UBC 0.014 ubiquitin C MUC5AC 0.014 mucin 5AC MUC5B 0.014 mucin 5, subtype B, tracheobronchial MED15 0.014 mediator complex subunit 15 isoform a MUC17 0.014 mucin 17 UBB 0.013 ubiquitin B precursor HIVEP3 0.013 human immunodeficiency virus type I enhancer bindin... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.