UBQLN1 7003

Name: UBQLN1	Sequence: fasta or formatted (561aa)		NCBI GI: 16753205
Description: ubiquilin 1 isoform 2		Referenced in: Proteasome
Other entries for this name: alt prot [589aa] ubiquilin 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.9 50 4 C cysteine 0.0 0 0 D aspartate 2.5 14 1 E glutamate 5.2 29 2 F phenylalanine 2.5 14 1 G glycine 9.1 51 2 H histidine 1.2 7 1 I isoleucine 3.6 20 1 K lysine 2.0 11 1 L leucine 9.4 53 2 M methionine 5.3 30 2 N asparagine 7.0 39 2 P proline 7.3 41 2 Q glutamine 10.3 58 3 R arginine 3.2 18 2 S serine 11.4 64 3 T threonine 7.5 42 2 V valine 2.9 16 1 W tryptophan 0.2 1 1 Y tyrosine 0.5 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubiquilin 1 isoform 2 UBQLN1 0.986 ubiquilin 1 isoform 1 UBQLN2 0.749 ubiquilin 2 UBQLN4 0.562 ataxin-1 ubiquitin-like interacting protein UBQLN3 0.296 ubiquilin 3 UBQLNL 0.153 ubiquilin-like UBL7 0.023 ubiquitin-like 7 UBL7 0.023 ubiquitin-like 7 MUC5AC 0.023 mucin 5AC MUC5B 0.023 mucin 5, subtype B, tracheobronchial SP4 0.021 Sp4 transcription factor BAT3 0.020 HLA-B associated transcript-3 isoform a MLL2 0.018 myeloid/lymphoid or mixed-lineage leukemia 2 ABCA2 0.018 ATP-binding cassette, sub-family A, member 2 isoform... ABCA2 0.018 ATP-binding cassette, sub-family A, member 2 isoform... BAT3 0.018 HLA-B associated transcript-3 isoform b BAT3 0.018 HLA-B associated transcript-3 isoform b BAT3 0.018 HLA-B associated transcript-3 isoform b POU6F2 0.016 POU domain, class 6, transcription factor 2 LOC100293409 0.015 PREDICTED: similar to Mucin-19 LOC100293268 0.015 PREDICTED: hypothetical protein LOC100291118 0.015 PREDICTED: hypothetical protein XP_002347351 RPS27A 0.015 ubiquitin and ribosomal protein S27a precursor [Hom... RPS27A 0.015 ubiquitin and ribosomal protein S27a precursor UBC 0.015 ubiquitin C FOXP4 0.015 forkhead box P4 isoform 3 FOXP4 0.015 forkhead box P4 isoform 2 FOXP4 0.015 forkhead box P4 isoform 1 APC 0.014 adenomatous polyposis coli APC 0.014 adenomatous polyposis coli Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.