SPG7 27586

Name: SPG7	Sequence: fasta or formatted (489aa)		NCBI GI: 40806173
Description: spastic paraplegia 7 isoform 2		Referenced in: Metalloproteases Mitochondria Overview of the Proteases
Other entries for this name: alt prot [795aa] spastic paraplegia 7 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.8 43 2 C cysteine 1.2 6 1 D aspartate 3.5 17 2 E glutamate 7.2 35 3 F phenylalanine 4.1 20 2 G glycine 10.2 50 2 H histidine 1.2 6 1 I isoleucine 2.5 12 1 K lysine 5.7 28 2 L leucine 12.3 60 5 M methionine 3.5 17 1 N asparagine 2.5 12 1 P proline 5.9 29 2 Q glutamine 3.5 17 1 R arginine 8.4 41 4 S serine 5.1 25 1 T threonine 4.1 20 2 V valine 7.2 35 2 W tryptophan 1.2 6 1 Y tyrosine 2.0 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 spastic paraplegia 7 isoform 2 SPG7 0.895 spastic paraplegia 7 isoform 1 AFG3L2 0.202 AFG3 ATPase family gene 3-like 2 YME1L1 0.138 YME1-like 1 isoform 1 YME1L1 0.138 YME1-like 1 isoform 3 VCP 0.103 valosin-containing protein SPATA5 0.097 spermatogenesis associated 5 PEX6 0.090 peroxisomal biogenesis factor 6 LOC652826 0.089 PREDICTED: similar to proteasome 26S ATPase subunit ... PSMC1 0.089 proteasome 26S ATPase subunit 1 PSMC4 0.089 proteasome 26S ATPase subunit 4 isoform 2 PSMC4 0.089 proteasome 26S ATPase subunit 4 isoform 1 NVL 0.088 nuclear VCP-like isoform 2 NVL 0.088 nuclear VCP-like isoform 1 PSMC2 0.087 proteasome 26S ATPase subunit 2 SPATA5L1 0.085 spermatogenesis associated 5-like 1 PSMC6 0.084 proteasome 26S ATPase subunit 6 PSMC5 0.083 proteasome 26S ATPase subunit 5 PSMC3 0.082 proteasome 26S ATPase subunit 3 PEX1 0.067 peroxin1 KATNAL2 0.064 katanin p60 subunit A-like 2 FIGNL1 0.062 fidgetin-like 1 FIGNL1 0.062 fidgetin-like 1 KATNA1 0.058 katanin p60 subunit A 1 KATNAL1 0.058 katanin p60 subunit A-like 1 KATNAL1 0.058 katanin p60 subunit A-like 1 SPAST 0.057 spastin isoform 2 SPAST 0.057 spastin isoform 1 VPS4B 0.055 vacuolar protein sorting factor 4B VPS4A 0.047 vacuolar protein sorting factor 4A Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.