EDA 32473

Name: EDA	Sequence: fasta or formatted (147aa)		NCBI GI: 54112105
Description: ectodysplasin A isoform EDA-C		Referenced in: TNF and Related Signals
Other entries for this name: alt prot [391aa] ectodysplasin A isoform EDA-A1 alt prot [389aa] ectodysplasin A isoform EDA-A2 alt prot [178aa] ectodysplasin A isoform EDA-B alt prot [142aa] ectodysplasin A isoform EDA-D alt prot [135aa] ectodysplasin A isoform EDA-O
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.5 14 4 C cysteine 3.4 5 2 D aspartate 2.7 4 1 E glutamate 7.5 11 1 F phenylalanine 2.0 3 2 G glycine 15.6 23 2 H histidine 3.4 5 1 I isoleucine 0.7 1 1 K lysine 0.7 1 1 L leucine 15.0 22 2 M methionine 0.7 1 1 N asparagine 0.7 1 1 P proline 8.8 13 1 Q glutamine 4.1 6 2 R arginine 7.5 11 2 S serine 10.9 16 2 T threonine 3.4 5 1 V valine 2.0 3 1 W tryptophan 0.0 0 0 Y tyrosine 1.4 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ectodysplasin A isoform EDA-C EDA 0.899 ectodysplasin A isoform EDA-B EDA 0.899 ectodysplasin A isoform EDA-A2 EDA 0.899 ectodysplasin A isoform EDA-A1 EDA 0.896 ectodysplasin A isoform EDA-O EDA 0.896 ectodysplasin A isoform EDA-D COL9A2 0.043 alpha 2 type IX collagen COL5A1 0.036 alpha 1 type V collagen preproprotein JUB 0.036 ajuba isoform 1 GPR25 0.036 G protein-coupled receptor 25 COL8A2 0.036 collagen, type VIII, alpha 2 COL27A1 0.029 collagen, type XXVII, alpha 1 COL5A3 0.029 collagen, type V, alpha 3 preproprotein FAM98C 0.029 hypothetical protein LOC147965 COL5A2 0.029 alpha 2 type V collagen preproprotein COL21A1 0.029 collagen, type XXI, alpha 1 precursor COL4A4 0.029 alpha 4 type IV collagen precursor COL16A1 0.029 alpha 1 type XVI collagen precursor COL2A1 0.025 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.025 collagen, type II, alpha 1 isoform 2 precursor [Hom... DLX2 0.025 distal-less homeobox 2 FCN2 0.025 ficolin 2 isoform a precursor COL4A6 0.025 type IV alpha 6 collagen isoform A precursor COL6A1 0.025 collagen, type VI, alpha 1 precursor COL4A6 0.025 type IV alpha 6 collagen isoform B precursor PROX2 0.025 prospero homeobox 2 TRIM7 0.025 tripartite motif-containing 7 isoform 1 TRIM7 0.025 tripartite motif-containing 7 isoform 4 COL1A2 0.025 alpha 2 type I collagen CCBE1 0.025 collagen and calcium binding EGF domains 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.