EDA 32475

Name: EDA	Sequence: fasta or formatted (135aa)		NCBI GI: 54112113
Description: ectodysplasin A isoform EDA-O		Referenced in: TNF and Related Signals
Other entries for this name: alt prot [391aa] ectodysplasin A isoform EDA-A1 alt prot [389aa] ectodysplasin A isoform EDA-A2 alt prot [178aa] ectodysplasin A isoform EDA-B alt prot [147aa] ectodysplasin A isoform EDA-C alt prot [142aa] ectodysplasin A isoform EDA-D
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 10 3 C cysteine 3.7 5 2 D aspartate 3.0 4 1 E glutamate 8.1 11 1 F phenylalanine 2.2 3 2 G glycine 16.3 22 2 H histidine 3.7 5 1 I isoleucine 0.7 1 1 K lysine 0.7 1 1 L leucine 15.6 21 2 M methionine 0.7 1 1 N asparagine 0.7 1 1 P proline 8.1 11 1 Q glutamine 5.2 7 2 R arginine 7.4 10 2 S serine 10.4 14 2 T threonine 3.7 5 1 V valine 0.7 1 1 W tryptophan 0.0 0 0 Y tyrosine 1.5 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ectodysplasin A isoform EDA-O EDA 0.973 ectodysplasin A isoform EDA-D EDA 0.973 ectodysplasin A isoform EDA-C EDA 0.973 ectodysplasin A isoform EDA-B EDA 0.973 ectodysplasin A isoform EDA-A2 EDA 0.973 ectodysplasin A isoform EDA-A1 JUB 0.047 ajuba isoform 1 GPR25 0.039 G protein-coupled receptor 25 COL5A1 0.035 alpha 1 type V collagen preproprotein COL27A1 0.031 collagen, type XXVII, alpha 1 FAM98C 0.031 hypothetical protein LOC147965 COL8A2 0.031 collagen, type VIII, alpha 2 COL21A1 0.031 collagen, type XXI, alpha 1 precursor COL4A4 0.031 alpha 4 type IV collagen precursor FCN2 0.027 ficolin 2 isoform a precursor COL16A1 0.027 alpha 1 type XVI collagen precursor PROX2 0.027 prospero homeobox 2 COL5A2 0.027 alpha 2 type V collagen preproprotein COL4A6 0.027 type IV alpha 6 collagen isoform A precursor COL4A6 0.027 type IV alpha 6 collagen isoform B precursor TRIM7 0.027 tripartite motif-containing 7 isoform 1 TRIM7 0.027 tripartite motif-containing 7 isoform 4 COL7A1 0.027 alpha 1 type VII collagen precursor COL9A2 0.027 alpha 2 type IX collagen COL11A2 0.023 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.023 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.023 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL6A1 0.023 collagen, type VI, alpha 1 precursor COL9A1 0.023 alpha 1 type IX collagen isoform 1 precursor COL6A6 0.023 collagen type VI alpha 6 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.