TRIM7 6511

Name: TRIM7	Sequence: fasta or formatted (221aa)		NCBI GI: 16076875
Description: tripartite motif-containing 7 isoform 4		Referenced in: Glycogen Tripartite Motif Family
Other entries for this name: alt prot [511aa] tripartite motif-containing 7 isoform 1 alt prot [303aa] tripartite motif-containing 7 isoform 3 alt prot [303aa] tripartite motif-containing 7 isoform 3 alt prot [303aa] tripartite motif-containing 7 isoform 3 alt prot [329aa] tripartite motif-containing 7 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 16.3 36 4 C cysteine 5.9 13 1 D aspartate 2.7 6 2 E glutamate 10.4 23 1 F phenylalanine 2.7 6 1 G glycine 7.2 16 1 H histidine 2.3 5 1 I isoleucine 1.8 4 1 K lysine 3.2 7 2 L leucine 9.5 21 2 M methionine 0.5 1 1 N asparagine 0.5 1 1 P proline 8.6 19 2 Q glutamine 4.1 9 1 R arginine 9.5 21 2 S serine 5.0 11 1 T threonine 3.2 7 1 V valine 5.4 12 2 W tryptophan 0.9 2 1 Y tyrosine 0.5 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 7 isoform 4 TRIM7 0.928 tripartite motif-containing 7 isoform 1 TRIM4 0.280 tripartite motif protein TRIM4 isoform beta TRIM27 0.270 ret finger protein TRIM17 0.261 tripartite motif-containing 17 isoform 3 TRIM17 0.261 tripartite motif-containing 17 isoform 1 TRIM17 0.261 tripartite motif-containing 17 isoform 1 TRIM11 0.259 tripartite motif-containing 11 TRIM4 0.256 tripartite motif protein TRIM4 isoform alpha TRIM39 0.256 tripartite motif-containing 39 isoform 2 TRIM39 0.256 tripartite motif-containing 39 isoform 1 TRIM58 0.252 tripartite motif-containing 58 TRIM21 0.238 tripartite motif protein 21 TRIM6 0.235 tripartite motif-containing 6 isoform 2 TRIM6 0.235 tripartite motif-containing 6 isoform 1 TRIM6-TRIM34 0.235 tripartite motif-containing 6 and tripartite motif-c... TRIM10 0.224 tripartite motif-containing 10 isoform 1 TRIM10 0.224 tripartite motif-containing 10 isoform 2 TRIM68 0.219 ring finger protein 137 TRIM5 0.212 tripartite motif protein TRIM5 isoform alpha TRIM5 0.205 tripartite motif protein TRIM5 isoform delta TRIM5 0.205 tripartite motif protein TRIM5 isoform gamma TRIM38 0.205 tripartite motif-containing 38 TRIM26 0.203 tripartite motif-containing 26 TRIM22 0.200 tripartite motif-containing 22 TRIM17 0.186 tripartite motif-containing 17 isoform 2 TRIM34 0.182 tripartite motif protein 34 isoform 3 TRIM34 0.182 tripartite motif protein 34 isoform 1 TRIM34 0.182 tripartite motif protein 34 isoform 1 TRIM75 0.179 tripartite motif-containing 75 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.