EDA 28580

Name: EDA	Sequence: fasta or formatted (391aa)		NCBI GI: 4503449
Description: ectodysplasin A isoform EDA-A1		Referenced in: TNF and Related Signals
Other entries for this name: alt prot [389aa] ectodysplasin A isoform EDA-A2 alt prot [178aa] ectodysplasin A isoform EDA-B alt prot [147aa] ectodysplasin A isoform EDA-C alt prot [142aa] ectodysplasin A isoform EDA-D alt prot [135aa] ectodysplasin A isoform EDA-O
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 26 3 C cysteine 2.0 8 2 D aspartate 3.3 13 1 E glutamate 6.1 24 3 F phenylalanine 3.3 13 3 G glycine 13.8 54 2 H histidine 2.0 8 1 I isoleucine 3.3 13 1 K lysine 5.1 20 3 L leucine 8.7 34 2 M methionine 1.5 6 1 N asparagine 3.6 14 1 P proline 11.3 44 2 Q glutamine 4.1 16 2 R arginine 5.4 21 2 S serine 7.4 29 2 T threonine 4.6 18 2 V valine 4.9 19 3 W tryptophan 0.3 1 1 Y tyrosine 2.6 10 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ectodysplasin A isoform EDA-A1 EDA 0.990 ectodysplasin A isoform EDA-A2 EDA 0.408 ectodysplasin A isoform EDA-B EDA 0.318 ectodysplasin A isoform EDA-C EDA 0.316 ectodysplasin A isoform EDA-O EDA 0.316 ectodysplasin A isoform EDA-D COLEC12 0.090 collectin sub-family member 12 COL17A1 0.090 alpha 1 type XVII collagen COL19A1 0.088 alpha 1 type XIX collagen precursor COL5A1 0.086 alpha 1 type V collagen preproprotein SCARA3 0.085 scavenger receptor class A, member 3 isoform 1 [Homo... COL1A2 0.085 alpha 2 type I collagen COL4A3 0.081 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.081 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.081 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.081 alpha 3 type IV collagen isoform 1 precursor COL22A1 0.081 collagen, type XXII, alpha 1 COL18A1 0.081 alpha 1 type XVIII collagen isoform 3 precursor [Ho... COL18A1 0.081 alpha 1 type XVIII collagen isoform 2 precursor [Ho... COL18A1 0.081 alpha 1 type XVIII collagen isoform 1 precursor [Ho... COL11A2 0.081 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.081 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.081 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL4A4 0.081 alpha 4 type IV collagen precursor COL3A1 0.080 collagen type III alpha 1 preproprotein COL10A1 0.080 type X collagen alpha 1 precursor COL2A1 0.079 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.079 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL5A2 0.079 alpha 2 type V collagen preproprotein LOC100293055 0.079 PREDICTED: similar to COL22A1 protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.