JUB 3949

Name: JUB	Sequence: fasta or formatted (538aa)		NCBI GI: 14249622
Description: ajuba isoform 1		Referenced in: LIM Domain Proteins
Other entries for this name: alt prot [121aa] ajuba isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.5 51 2 C cysteine 5.9 32 3 D aspartate 4.1 22 1 E glutamate 6.5 35 2 F phenylalanine 3.3 18 1 G glycine 13.4 72 2 H histidine 2.4 13 1 I isoleucine 2.2 12 1 K lysine 2.8 15 1 L leucine 8.0 43 3 M methionine 1.3 7 1 N asparagine 1.9 10 1 P proline 9.7 52 3 Q glutamine 3.3 18 1 R arginine 7.6 41 2 S serine 8.6 46 3 T threonine 2.6 14 1 V valine 3.0 16 1 W tryptophan 0.0 0 0 Y tyrosine 3.9 21 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ajuba isoform 1 WTIP 0.290 Wilms tumor 1 interacting protein LIMD1 0.275 LIM domains containing 1 JUB 0.229 ajuba isoform 2 LPP 0.186 LIM domain containing preferred translocation partner... TRIP6 0.178 thyroid receptor-interacting protein 6 ZYX 0.157 zyxin ZYX 0.157 zyxin FBLIM1 0.131 filamin-binding LIM protein-1 isoform a FBLIM1 0.131 filamin-binding LIM protein-1 isoform c FBLIM1 0.073 filamin-binding LIM protein-1 isoform b LPXN 0.064 leupaxin isoform 1 LPXN 0.064 leupaxin isoform 2 PXN 0.061 paxillin isoform 2 PXN 0.060 paxillin isoform 3 LIMS1 0.058 LIM and senescent cell antigen-like domains 1 PXN 0.058 paxillin isoform 1 TGFB1I1 0.056 transforming growth factor beta 1 induced transcrip... TGFB1I1 0.056 transforming growth factor beta 1 induced transcript... LOC100288695 0.055 PREDICTED: hypothetical protein XP_002342298 LIMS2 0.051 LIM and senescent cell antigen-like domains 2 isofo... LIMS2 0.051 LIM and senescent cell antigen-like domains 2 isofo... LIMS2 0.051 LIM and senescent cell antigen-like domains 2 isofo... LIMS2 0.051 LIM and senescent cell antigen-like domains 2 isofor... FHL3 0.051 four and a half LIM domains 3 ABLIM1 0.050 actin-binding LIM protein 1 isoform c ABLIM1 0.050 actin-binding LIM protein 1 isoform b ABLIM1 0.050 actin-binding LIM protein 1 isoform a LDB3 0.049 LIM domain binding 3 isoform 1 FHL1 0.048 four and a half LIM domains 1 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.