EDA 32474

Name: EDA	Sequence: fasta or formatted (142aa)		NCBI GI: 54112107
Description: ectodysplasin A isoform EDA-D		Referenced in: TNF and Related Signals
Other entries for this name: alt prot [391aa] ectodysplasin A isoform EDA-A1 alt prot [389aa] ectodysplasin A isoform EDA-A2 alt prot [178aa] ectodysplasin A isoform EDA-B alt prot [147aa] ectodysplasin A isoform EDA-C alt prot [135aa] ectodysplasin A isoform EDA-O
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 11 3 C cysteine 4.2 6 2 D aspartate 2.8 4 1 E glutamate 7.7 11 1 F phenylalanine 2.8 4 2 G glycine 14.8 21 2 H histidine 2.8 4 1 I isoleucine 0.7 1 1 K lysine 0.7 1 1 L leucine 16.9 24 2 M methionine 0.7 1 1 N asparagine 0.7 1 1 P proline 8.5 12 1 Q glutamine 4.9 7 2 R arginine 7.0 10 2 S serine 10.6 15 2 T threonine 3.5 5 1 V valine 1.4 2 1 W tryptophan 0.0 0 0 Y tyrosine 1.4 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ectodysplasin A isoform EDA-D EDA 0.929 ectodysplasin A isoform EDA-O EDA 0.929 ectodysplasin A isoform EDA-C EDA 0.929 ectodysplasin A isoform EDA-B EDA 0.929 ectodysplasin A isoform EDA-A2 EDA 0.929 ectodysplasin A isoform EDA-A1 JUB 0.045 ajuba isoform 1 GPR25 0.037 G protein-coupled receptor 25 COL27A1 0.030 collagen, type XXVII, alpha 1 FAM98C 0.030 hypothetical protein LOC147965 COL21A1 0.030 collagen, type XXI, alpha 1 precursor COL4A4 0.030 alpha 4 type IV collagen precursor COL5A1 0.026 alpha 1 type V collagen preproprotein FCN2 0.026 ficolin 2 isoform a precursor COL16A1 0.026 alpha 1 type XVI collagen precursor PROX2 0.026 prospero homeobox 2 COL4A6 0.026 type IV alpha 6 collagen isoform A precursor COL4A6 0.026 type IV alpha 6 collagen isoform B precursor TRIM7 0.026 tripartite motif-containing 7 isoform 1 TRIM7 0.026 tripartite motif-containing 7 isoform 4 COL8A2 0.022 collagen, type VIII, alpha 2 COL6A1 0.022 collagen, type VI, alpha 1 precursor COL9A1 0.022 alpha 1 type IX collagen isoform 1 precursor NFKBIL2 0.022 NF-kappa-B inhibitor-like protein 2 C1orf65 0.022 hypothetical protein LOC164127 COL3A1 0.022 collagen type III alpha 1 preproprotein COL5A3 0.022 collagen, type V, alpha 3 preproprotein PTCH1 0.019 patched isoform L LOC100128398 0.019 PREDICTED: hypothetical protein LOC100128398 0.019 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.