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Search of human proteins with 4757852
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4757852 BCS1-like [Homo sapiens]
(419 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|119964730 BCS1-like [Homo sapiens] 849 0.0
gi|4757852 BCS1-like [Homo sapiens] 849 0.0
gi|24430151 proteasome 26S ATPase subunit 1 [Homo sapiens] 74 2e-13
gi|24497435 proteasome 26S ATPase subunit 5 [Homo sapiens] 70 3e-12
gi|45643125 nuclear VCP-like isoform 2 [Homo sapiens] 70 3e-12
gi|45643123 nuclear VCP-like isoform 1 [Homo sapiens] 70 3e-12
gi|5802970 AFG3 ATPase family gene 3-like 2 [Homo sapiens] 69 6e-12
gi|195539395 proteasome 26S ATPase subunit 6 [Homo sapiens] 69 6e-12
gi|21327685 YME1-like 1 isoform 1 [Homo sapiens] 69 1e-11
gi|7657689 YME1-like 1 isoform 3 [Homo sapiens] 69 1e-11
gi|4507173 spastic paraplegia 7 isoform 1 [Homo sapiens] 68 2e-11
gi|157671927 spermatogenesis associated 5 [Homo sapiens] 64 3e-10
gi|6005942 valosin-containing protein [Homo sapiens] 63 6e-10
gi|194018488 peroxisomal biogenesis factor 6 [Homo sapiens] 61 2e-09
gi|89064750 PREDICTED: similar to proteasome 26S ATPase subunit ... 61 2e-09
gi|24430155 proteasome 26S ATPase subunit 4 isoform 2 [Homo sapi... 61 2e-09
gi|5729991 proteasome 26S ATPase subunit 4 isoform 1 [Homo sapiens] 61 2e-09
gi|229577436 spermatogenesis associated 5-like 1 [Homo sapiens] 59 6e-09
gi|4506209 proteasome 26S ATPase subunit 2 [Homo sapiens] 59 1e-08
gi|21361144 proteasome 26S ATPase subunit 3 [Homo sapiens] 58 2e-08
gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens] 54 2e-07
gi|156564401 vesicle-fusing ATPase [Homo sapiens] 53 5e-07
gi|153792536 ATPase family, AAA domain containing 2B [Homo sapiens] 53 5e-07
gi|113426932 PREDICTED: similar to N-ethylmaleimide-sensitive fa... 52 1e-06
gi|169167838 PREDICTED: similar to hCG2002932 [Homo sapiens] 50 3e-06
gi|239748566 PREDICTED: similar to hCG2002932 [Homo sapiens] 50 3e-06
gi|239742549 PREDICTED: hypothetical protein LOC345645 [Homo sap... 50 3e-06
gi|4505725 peroxin1 [Homo sapiens] 50 3e-06
gi|7019569 vacuolar protein sorting factor 4A [Homo sapiens] 48 2e-05
gi|31377644 ATPase family, AAA domain containing 1 [Homo sapiens] 46 6e-05
>gi|119964730 BCS1-like [Homo sapiens]
Length = 419
Score = 849 bits (2193), Expect = 0.0
Identities = 419/419 (100%), Positives = 419/419 (100%)
Query: 1 MPLSDFILALKDNPYFGAGFGLVGVGTALALARKGVQLGLVAFRRHYMITLEVPARDRSY 60
MPLSDFILALKDNPYFGAGFGLVGVGTALALARKGVQLGLVAFRRHYMITLEVPARDRSY
Sbjct: 1 MPLSDFILALKDNPYFGAGFGLVGVGTALALARKGVQLGLVAFRRHYMITLEVPARDRSY 60
Query: 61 AWLLSWLTRHSTRTQHLSVETSYLQHESGRISTKFEFVPSPGNHFIWYRGKWIRVERSRE 120
AWLLSWLTRHSTRTQHLSVETSYLQHESGRISTKFEFVPSPGNHFIWYRGKWIRVERSRE
Sbjct: 61 AWLLSWLTRHSTRTQHLSVETSYLQHESGRISTKFEFVPSPGNHFIWYRGKWIRVERSRE 120
Query: 121 MQMIDLQTGTPWESVTFTALGTDRKVFFNILEEARELALQQEEGKTVMYTAVGSEWRPFG 180
MQMIDLQTGTPWESVTFTALGTDRKVFFNILEEARELALQQEEGKTVMYTAVGSEWRPFG
Sbjct: 121 MQMIDLQTGTPWESVTFTALGTDRKVFFNILEEARELALQQEEGKTVMYTAVGSEWRPFG 180
Query: 181 YPRRRRPLNSVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFI 240
YPRRRRPLNSVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFI
Sbjct: 181 YPRRRRPLNSVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFI 240
Query: 241 TALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVENPVK 300
TALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVENPVK
Sbjct: 241 TALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVENPVK 300
Query: 301 YQGLGRLTFSGLLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSHWQ 360
YQGLGRLTFSGLLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSHWQ
Sbjct: 301 YQGLGRLTFSGLLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSHWQ 360
Query: 361 LTQMFQRFYPGQAPSLAENFAEHVLRATNQISPAQVQGYFMLYKNDPVGAIHNAESLRR 419
LTQMFQRFYPGQAPSLAENFAEHVLRATNQISPAQVQGYFMLYKNDPVGAIHNAESLRR
Sbjct: 361 LTQMFQRFYPGQAPSLAENFAEHVLRATNQISPAQVQGYFMLYKNDPVGAIHNAESLRR 419
>gi|4757852 BCS1-like [Homo sapiens]
Length = 419
Score = 849 bits (2193), Expect = 0.0
Identities = 419/419 (100%), Positives = 419/419 (100%)
Query: 1 MPLSDFILALKDNPYFGAGFGLVGVGTALALARKGVQLGLVAFRRHYMITLEVPARDRSY 60
MPLSDFILALKDNPYFGAGFGLVGVGTALALARKGVQLGLVAFRRHYMITLEVPARDRSY
Sbjct: 1 MPLSDFILALKDNPYFGAGFGLVGVGTALALARKGVQLGLVAFRRHYMITLEVPARDRSY 60
Query: 61 AWLLSWLTRHSTRTQHLSVETSYLQHESGRISTKFEFVPSPGNHFIWYRGKWIRVERSRE 120
AWLLSWLTRHSTRTQHLSVETSYLQHESGRISTKFEFVPSPGNHFIWYRGKWIRVERSRE
Sbjct: 61 AWLLSWLTRHSTRTQHLSVETSYLQHESGRISTKFEFVPSPGNHFIWYRGKWIRVERSRE 120
Query: 121 MQMIDLQTGTPWESVTFTALGTDRKVFFNILEEARELALQQEEGKTVMYTAVGSEWRPFG 180
MQMIDLQTGTPWESVTFTALGTDRKVFFNILEEARELALQQEEGKTVMYTAVGSEWRPFG
Sbjct: 121 MQMIDLQTGTPWESVTFTALGTDRKVFFNILEEARELALQQEEGKTVMYTAVGSEWRPFG 180
Query: 181 YPRRRRPLNSVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFI 240
YPRRRRPLNSVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFI
Sbjct: 181 YPRRRRPLNSVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFI 240
Query: 241 TALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVENPVK 300
TALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVENPVK
Sbjct: 241 TALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVENPVK 300
Query: 301 YQGLGRLTFSGLLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSHWQ 360
YQGLGRLTFSGLLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSHWQ
Sbjct: 301 YQGLGRLTFSGLLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSHWQ 360
Query: 361 LTQMFQRFYPGQAPSLAENFAEHVLRATNQISPAQVQGYFMLYKNDPVGAIHNAESLRR 419
LTQMFQRFYPGQAPSLAENFAEHVLRATNQISPAQVQGYFMLYKNDPVGAIHNAESLRR
Sbjct: 361 LTQMFQRFYPGQAPSLAENFAEHVLRATNQISPAQVQGYFMLYKNDPVGAIHNAESLRR 419
>gi|24430151 proteasome 26S ATPase subunit 1 [Homo sapiens]
Length = 440
Score = 74.3 bits (181), Expect = 2e-13
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 18/168 (10%)
Query: 196 GLADRIVRDVQEFID----NPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSI 251
G D +++++E ++ +P++Y + GI +G +LYGPPG GK+ A+A + S
Sbjct: 188 GGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT--SA 245
Query: 252 CLLSLTDSSLSDDRLN-------HLLSVAPQQ--SLVLLEDVDAAFLSRDLAVENPVKYQ 302
L + S L L L VA + S+V ++++DA R N +
Sbjct: 246 TFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR--YDSNSGGER 303
Query: 303 GLGRLTFSGLLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLK 350
+ R T LLN LDG S V M TN ++ LDPALIRPGR+D K
Sbjct: 304 EIQR-TMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRK 350
>gi|24497435 proteasome 26S ATPase subunit 5 [Homo sapiens]
Length = 406
Score = 70.5 bits (171), Expect = 3e-12
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 20/169 (11%)
Query: 196 GLADRIVRDVQEFID----NPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSI 251
G D+ +++++E I+ +P+ + GI +G LLYGPPG GK+ A+A H+
Sbjct: 152 GGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA---HHTD 208
Query: 252 C-LLSLTDSSLSDD------RLNHLLSVAPQQ---SLVLLEDVDAAFLSRDLAVENPVKY 301
C + ++ S L R+ L V ++ S++ ++++D+ SR +E
Sbjct: 209 CTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR---LEGGSGG 265
Query: 302 QGLGRLTFSGLLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLK 350
+ T LLN LDG +T+ V M TN +D LD AL+RPGR+D K
Sbjct: 266 DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRK 314
>gi|45643125 nuclear VCP-like isoform 2 [Homo sapiens]
Length = 750
Score = 70.5 bits (171), Expect = 3e-12
Identities = 49/151 (32%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
Query: 211 NPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTD-----SSLSDDR 265
+P+ Y G+ RG LL+GPPGCGK+ A+AGEL+ I ++ + S S+ +
Sbjct: 180 HPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQK 239
Query: 266 LNHLL--SVAPQQSLVLLEDVDAAFLSRDLAVENPVKYQGLGRLTFSGLLNALDGVASTE 323
L L +V+ ++ ++++DA R++A ++ + LT ++ L+ VA+T
Sbjct: 240 LRELFEQAVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLT---CMDDLNNVAATA 296
Query: 324 ARIVFMTTNHVDRLDPALIRPGRVDLKEYVG 354
+V TN D LDPAL R GR D + +G
Sbjct: 297 RVLVIGATNRPDSLDPALRRAGRFDREICLG 327
Score = 58.2 bits (139), Expect = 1e-08
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 17/155 (10%)
Query: 209 IDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSL------- 261
+ NP + G+ G LL GPPGCGK+ A+A E + +S+ L
Sbjct: 495 VRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANE--SGLNFISVKGPELLNMYVGE 552
Query: 262 SDDRLNHLLSVAPQQS--LVLLEDVDAAFLSRDLAVENPVKYQGLGRLTFSGLLNALDGV 319
S+ + + A + ++ ++VDA L + G + LL +DG+
Sbjct: 553 SERAVRQVFQRAKNSAPCVIFFDEVDA------LCPRRSDRETGASVRVVNQLLTEMDGL 606
Query: 320 ASTEARIVFMTTNHVDRLDPALIRPGRVDLKEYVG 354
+ + + TN D +DPA++RPGR+D +VG
Sbjct: 607 EARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVG 641
>gi|45643123 nuclear VCP-like isoform 1 [Homo sapiens]
Length = 856
Score = 70.5 bits (171), Expect = 3e-12
Identities = 49/151 (32%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
Query: 211 NPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTD-----SSLSDDR 265
+P+ Y G+ RG LL+GPPGCGK+ A+AGEL+ I ++ + S S+ +
Sbjct: 286 HPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQK 345
Query: 266 LNHLL--SVAPQQSLVLLEDVDAAFLSRDLAVENPVKYQGLGRLTFSGLLNALDGVASTE 323
L L +V+ ++ ++++DA R++A ++ + LT ++ L+ VA+T
Sbjct: 346 LRELFEQAVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLT---CMDDLNNVAATA 402
Query: 324 ARIVFMTTNHVDRLDPALIRPGRVDLKEYVG 354
+V TN D LDPAL R GR D + +G
Sbjct: 403 RVLVIGATNRPDSLDPALRRAGRFDREICLG 433
Score = 58.2 bits (139), Expect = 1e-08
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 17/155 (10%)
Query: 209 IDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSL------- 261
+ NP + G+ G LL GPPGCGK+ A+A E + +S+ L
Sbjct: 601 VRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANE--SGLNFISVKGPELLNMYVGE 658
Query: 262 SDDRLNHLLSVAPQQS--LVLLEDVDAAFLSRDLAVENPVKYQGLGRLTFSGLLNALDGV 319
S+ + + A + ++ ++VDA L + G + LL +DG+
Sbjct: 659 SERAVRQVFQRAKNSAPCVIFFDEVDA------LCPRRSDRETGASVRVVNQLLTEMDGL 712
Query: 320 ASTEARIVFMTTNHVDRLDPALIRPGRVDLKEYVG 354
+ + + TN D +DPA++RPGR+D +VG
Sbjct: 713 EARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVG 747
>gi|5802970 AFG3 ATPase family gene 3-like 2 [Homo sapiens]
Length = 797
Score = 69.3 bits (168), Expect = 6e-12
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 10/160 (6%)
Query: 202 VRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDS-- 259
+ + F+ NPK Y D G +G +L GPPG GK+ A AGE +S ++
Sbjct: 320 IMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLE 379
Query: 260 ---SLSDDRLNHLLSVAPQQS--LVLLEDVDAAFLSRDLAVENPVKYQGLGRLTFSGLLN 314
+ R+ L ++A + + ++ ++++DA R Q T + LL
Sbjct: 380 MFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRG---RGNFGGQSEQENTLNQLLV 436
Query: 315 ALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLKEYVG 354
+DG +T ++ TN D LDPAL+RPGR D + ++G
Sbjct: 437 EMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIG 476
>gi|195539395 proteasome 26S ATPase subunit 6 [Homo sapiens]
Length = 403
Score = 69.3 bits (168), Expect = 6e-12
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 25/174 (14%)
Query: 196 GLADRIVRDVQEFID----NPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSI 251
GL+++I R+++E I+ NP+ + GI +G LLYGPPG GK+ A+A +L+ +
Sbjct: 151 GLSEQI-RELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNF 209
Query: 252 CLLSLTDSSLSDDRLNHLLSVAP---------QQSLVLLEDVDAAF---LSRDLAVENPV 299
L + SS+ D + + Q ++ ++++DA S + + +
Sbjct: 210 --LKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREI 267
Query: 300 KYQGLGRLTFSGLLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLKEYV 353
+ T LLN +DG + + M TN D LDPAL+RPGR+D K ++
Sbjct: 268 QR------TLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 315
>gi|21327685 YME1-like 1 isoform 1 [Homo sapiens]
Length = 773
Score = 68.6 bits (166), Expect = 1e-11
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 12/160 (7%)
Query: 198 ADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLT 257
A + +++V EF+ NP+ +T G +G LL GPPG GK+ A+AGE + S +
Sbjct: 347 AKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGS 406
Query: 258 D-----SSLSDDRLNHLLSVAPQQS--LVLLEDVDAAFLSRDLAVENPVKYQGLGRLTFS 310
+ + R+ +L A + ++ ++++D+ R +E+P+ R T +
Sbjct: 407 EFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR---IESPM--HPYSRQTIN 461
Query: 311 GLLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLK 350
LL +DG E I+ TN + LD ALIRPGR D++
Sbjct: 462 QLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQ 501
>gi|7657689 YME1-like 1 isoform 3 [Homo sapiens]
Length = 716
Score = 68.6 bits (166), Expect = 1e-11
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 12/160 (7%)
Query: 198 ADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLT 257
A + +++V EF+ NP+ +T G +G LL GPPG GK+ A+AGE + S +
Sbjct: 290 AKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGS 349
Query: 258 D-----SSLSDDRLNHLLSVAPQQS--LVLLEDVDAAFLSRDLAVENPVKYQGLGRLTFS 310
+ + R+ +L A + ++ ++++D+ R +E+P+ R T +
Sbjct: 350 EFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR---IESPM--HPYSRQTIN 404
Query: 311 GLLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLK 350
LL +DG E I+ TN + LD ALIRPGR D++
Sbjct: 405 QLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQ 444
>gi|4507173 spastic paraplegia 7 isoform 1 [Homo sapiens]
Length = 795
Score = 67.8 bits (164), Expect = 2e-11
Identities = 46/173 (26%), Positives = 86/173 (49%), Gaps = 9/173 (5%)
Query: 202 VRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTD--- 258
VR+ +++ +P+ + G +G LL GPPGCGK+ A+A E + ++ +
Sbjct: 321 VREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVE 380
Query: 259 --SSLSDDRLNHLLSVAPQQS--LVLLEDVDAAFLSRDLAVENPVKYQGLGRLTFSGLLN 314
L R+ L A ++ +V ++++DA R + + T + LL
Sbjct: 381 VIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGFSNTEE--EQTLNQLLV 438
Query: 315 ALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQR 367
+DG+ +T+ IV +TN D LD AL+RPGR+D ++ + + ++F++
Sbjct: 439 EMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQERREIFEQ 491
>gi|157671927 spermatogenesis associated 5 [Homo sapiens]
Length = 893
Score = 63.5 bits (153), Expect = 3e-10
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 25/159 (15%)
Query: 209 IDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSD----- 263
+ +P+ + GI +G LLYGPPGC K+ ALA E + L++ L +
Sbjct: 647 LKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANE--SGLNFLAIKGPELMNKYVGE 704
Query: 264 ------DRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVENPVKYQGLGRLT---FSGLLN 314
+ +VAP S++ +++DA + R ++ G G + + LL
Sbjct: 705 SERAVRETFRKARAVAP--SIIFFDELDALAVERGSSL-------GAGNVADRVLAQLLT 755
Query: 315 ALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLKEYV 353
+DG+ + + TN DR+D AL+RPGR+D YV
Sbjct: 756 EMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYV 794
Score = 62.0 bits (149), Expect = 1e-09
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 200 RIVRDVQEF-IDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTD 258
+ +R++ E + P+ + GIP RG LLYGPPG GK+ A+A E+ + +++ +
Sbjct: 363 KAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPE 422
Query: 259 -----SSLSDDRLNHLLSVAP--QQSLVLLEDVDAAFLSRDLAVENPVKYQGLGRLTFSG 311
++ +L + + A S++ ++++DA R+ +N V+ + +
Sbjct: 423 IISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKRE-GAQNEVE-----KRVVAS 476
Query: 312 LLNALDGVASTEAR---IVFMTTNHVDRLDPALIRPGRVDLKEYVG 354
LL +DG+ S + +V TN LD AL RPGR D + +G
Sbjct: 477 LLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIG 522
>gi|6005942 valosin-containing protein [Homo sapiens]
Length = 806
Score = 62.8 bits (151), Expect = 6e-10
Identities = 46/171 (26%), Positives = 84/171 (49%), Gaps = 19/171 (11%)
Query: 196 GLADRIVRDVQEFIDNPKWYTDR----GIPYRRGYLLYGPPGCGKSSFITALAGELEHSI 251
GL D + R++QE + P + D+ G+ +G L YGPPGCGK+ A+A E + +
Sbjct: 481 GLED-VKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQAN- 538
Query: 252 CLLSLTDSSL-------SDDRLNHLLSVAPQQS--LVLLEDVDAAFLSRDLAVENPVKYQ 302
+S+ L S+ + + A Q + ++ +++D+ +R N
Sbjct: 539 -FISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG---GNIGDGG 594
Query: 303 GLGRLTFSGLLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLKEYV 353
G + +L +DG+++ + + TN D +DPA++RPGR+D Y+
Sbjct: 595 GAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 645
Score = 55.1 bits (131), Expect = 1e-07
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 18/197 (9%)
Query: 170 TAVGSEWRPFGYPRRRRPLNSVVLQQ-GLADRIVRDVQEFID----NPKWYTDRGIPYRR 224
T + E P LN V G + + ++E ++ +P + G+ R
Sbjct: 180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR 239
Query: 225 GYLLYGPPGCGKSSFITALAGELEHSICLLSLTD--SSLSDDRLNHLLSVAPQ-----QS 277
G LLYGPPG GK+ A+A E L++ + S L+ + ++L + +
Sbjct: 240 GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA 299
Query: 278 LVLLEDVDAAFLSRDLAVENPVKYQGLGRLTFSGLLNALDGVASTEARIVFMTTNHVDRL 337
++ ++++DA +A + + + R S LL +DG+ IV TN + +
Sbjct: 300 IIFIDELDA------IAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSI 353
Query: 338 DPALIRPGRVDLKEYVG 354
DPAL R GR D + +G
Sbjct: 354 DPALRRFGRFDREVDIG 370
>gi|194018488 peroxisomal biogenesis factor 6 [Homo sapiens]
Length = 980
Score = 61.2 bits (147), Expect = 2e-09
Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 15/141 (10%)
Query: 223 RRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSL-------SDDRLNHLLSVAPQ 275
R G LL+GPPG GK+ A+A E S+ LS+ L S++ + + + A
Sbjct: 737 RSGLLLHGPPGTGKTLLAKAVATEC--SLTFLSVKGPELINMYVGQSEENVREVFARARA 794
Query: 276 QS--LVLLEDVDAAFLSRDLAVENPVKYQGLGRLTFSGLLNALDGVASTEARIVFMTTNH 333
+ ++ +++D+ SR + ++ G+ S LL LDG+ ST+ V TN
Sbjct: 795 AAPCIIFFDELDSLAPSRGRSGDSG----GVMDRVVSQLLAELDGLHSTQDVFVIGATNR 850
Query: 334 VDRLDPALIRPGRVDLKEYVG 354
D LDPAL+RPGR D +VG
Sbjct: 851 PDLLDPALLRPGRFDKLVFVG 871
Score = 30.0 bits (66), Expect = 4.1
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 227 LLYGPPGCGKSSFITALAGELEHSICLLSLTDSSL 261
LL GPPGCGK++ + A L + LL + SSL
Sbjct: 467 LLRGPPGCGKTTVVAAACSHL--GLHLLKVPCSSL 499
>gi|89064750 PREDICTED: similar to proteasome 26S ATPase subunit 4
[Homo sapiens]
Length = 414
Score = 60.8 bits (146), Expect = 2e-09
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 18/161 (11%)
Query: 203 RDVQEFIDNP----KWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTD 258
++V+E ++ P + Y GI RG L+YGPPGCGK+ A+A + + +
Sbjct: 171 QEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT--TAAFIRVVG 228
Query: 259 SSLSDDRLNH---------LLSVAPQQSLVLLEDVDAAFLSRDLAVENPVKYQGLGRLTF 309
S L L+ +++ ++++DA R A + + R+
Sbjct: 229 SEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADRE--VQRILL 286
Query: 310 SGLLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLK 350
LLN +DG V M TN D LDPAL+RPGR+D K
Sbjct: 287 E-LLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRK 326
>gi|24430155 proteasome 26S ATPase subunit 4 isoform 2 [Homo
sapiens]
Length = 387
Score = 60.8 bits (146), Expect = 2e-09
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 18/161 (11%)
Query: 203 RDVQEFIDNP----KWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTD 258
++V+E ++ P + Y GI RG L+YGPPGCGK+ A+A + + +
Sbjct: 144 QEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT--TAAFIRVVG 201
Query: 259 SSLSDDRLNH---------LLSVAPQQSLVLLEDVDAAFLSRDLAVENPVKYQGLGRLTF 309
S L L+ +++ ++++DA R A + + R+
Sbjct: 202 SEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADRE--VQRILL 259
Query: 310 SGLLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLK 350
LLN +DG V M TN D LDPAL+RPGR+D K
Sbjct: 260 E-LLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRK 299
>gi|5729991 proteasome 26S ATPase subunit 4 isoform 1 [Homo sapiens]
Length = 418
Score = 60.8 bits (146), Expect = 2e-09
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 18/161 (11%)
Query: 203 RDVQEFIDNP----KWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTD 258
++V+E ++ P + Y GI RG L+YGPPGCGK+ A+A + + +
Sbjct: 175 QEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT--TAAFIRVVG 232
Query: 259 SSLSDDRLNH---------LLSVAPQQSLVLLEDVDAAFLSRDLAVENPVKYQGLGRLTF 309
S L L+ +++ ++++DA R A + + R+
Sbjct: 233 SEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADRE--VQRILL 290
Query: 310 SGLLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLK 350
LLN +DG V M TN D LDPAL+RPGR+D K
Sbjct: 291 E-LLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRK 330
>gi|229577436 spermatogenesis associated 5-like 1 [Homo sapiens]
Length = 753
Score = 59.3 bits (142), Expect = 6e-09
Identities = 51/156 (32%), Positives = 71/156 (45%), Gaps = 24/156 (15%)
Query: 212 PKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSL----------TDSSL 261
P+ T G+ RG LL GPPG GK+ + A+A E + +S T+ ++
Sbjct: 223 PRALTALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGSRPGETEENV 282
Query: 262 SD--DRLNHLLSVAPQQSLVLLEDVDAAFLSR-DLAVENPVKYQGLGRLTFSGLLNALDG 318
R L S P SL+ L+++DA R A E+ V Q +L LDG
Sbjct: 283 RRVFQRARELASRGP--SLLFLDEMDALCPQRGSRAPESRVVAQ---------VLTLLDG 331
Query: 319 VASTEARIVFMTTNHVDRLDPALIRPGRVDLKEYVG 354
+ +V TN D LDPAL RPGR D + +G
Sbjct: 332 ASGDREVVVVGATNRPDALDPALRRPGRFDREVVIG 367
Score = 53.5 bits (127), Expect = 3e-07
Identities = 48/168 (28%), Positives = 72/168 (42%), Gaps = 30/168 (17%)
Query: 212 PKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTD--SSLSDDRLNHL 269
P + G+ +G LLYGPPGC K++ + ALA S +S D S D L
Sbjct: 487 PWEFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVL 546
Query: 270 LSV-----APQQSLVLLEDVDAAFLSRDLAVENPVKYQGLGRLTFSGLLNALDGVA--ST 322
+ A +++ L+++D+ +R + + S LLN LDGV +
Sbjct: 547 SQIFRQARASTPAILFLDEIDSILGARSASKTG----CDVQERVLSVLLNELDGVGLKTI 602
Query: 323 EAR-----------------IVFMTTNHVDRLDPALIRPGRVDLKEYV 353
E R ++ TN D LD AL+RPGR+D Y+
Sbjct: 603 ERRGSKSSQQEFQEVFNRSVMIIAATNRPDVLDTALLRPGRLDKIIYI 650
>gi|4506209 proteasome 26S ATPase subunit 2 [Homo sapiens]
Length = 433
Score = 58.5 bits (140), Expect = 1e-08
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 24/165 (14%)
Query: 202 VRDVQEFIDNPKWYTDR----GIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLT 257
+ ++E ++ P + +R GI +G LL+GPPG GK+ A+A + C + +
Sbjct: 184 IEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTD--ACFIRVI 241
Query: 258 DSSLSDD-------RLNHLLSVAPQQS--LVLLEDVDA---AFLSRDLAVENPVKYQGLG 305
S L + L +A + L+ +++DA A +N V+
Sbjct: 242 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQR---- 297
Query: 306 RLTFSGLLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLK 350
T L+N LDG V M TN D LDPAL+RPGR+D K
Sbjct: 298 --TMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
>gi|21361144 proteasome 26S ATPase subunit 3 [Homo sapiens]
Length = 439
Score = 57.8 bits (138), Expect = 2e-08
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 20/169 (11%)
Query: 196 GLADRIVRDVQEFIDNPKWYTDR----GIPYRRGYLLYGPPGCGKSSFITALAGELEHSI 251
G D+ ++++ E I P + ++ GI +G L+YGPPG GK+ A A + + +
Sbjct: 189 GGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATF 248
Query: 252 CLLS---LTDSSLSDD----RLNHLLSVAPQQSLVLLEDVDAAFLSR---DLAVENPVKY 301
L+ L + D R L+ S++ ++++DA R + A + V+
Sbjct: 249 LKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQR 308
Query: 302 QGLGRLTFSGLLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLK 350
T LLN LDG V TN VD LDPAL+R GR+D K
Sbjct: 309 ------TMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRK 351
>gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]
Length = 1390
Score = 54.3 bits (129), Expect = 2e-07
Identities = 42/137 (30%), Positives = 58/137 (42%), Gaps = 18/137 (13%)
Query: 224 RGYLLYGPPGCGKSSFITALAGELEH------------SICLLSLTDSSLSDDRLNHLLS 271
RG L YGPPG GK+ ALA E + CL S RL +
Sbjct: 461 RGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQA 520
Query: 272 VAPQQSLVLLEDVDAAFLSRDLAVENPVKYQGLGRLTFSGLLNALDGVASTEARIVFMTT 331
+ S++ +++D LA + + S LL +DG+ S +V T
Sbjct: 521 YQMRPSIIFFDEIDG------LAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGAT 574
Query: 332 NHVDRLDPALIRPGRVD 348
N +D +DPAL RPGR D
Sbjct: 575 NRLDSIDPALRRPGRFD 591
>gi|156564401 vesicle-fusing ATPase [Homo sapiens]
Length = 744
Score = 53.1 bits (126), Expect = 5e-07
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 30/164 (18%)
Query: 212 PKWYTDRGIPYRRGYLLYGPPGCGKS---------------------SFITALAGELEHS 250
P+ G + +G LLYGPPGCGK+ + GE E +
Sbjct: 242 PEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEAN 301
Query: 251 ICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVENPVKYQGLGRLTFS 310
I L D+ RL + +++ +++DA R + G+ +
Sbjct: 302 IRKL-FADAEEEQRRLGANSGL----HIIIFDEIDAICKQRGSMAGST----GVHDTVVN 352
Query: 311 GLLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLKEYVG 354
LL+ +DGV +V TN D +D AL+RPGR+++K +G
Sbjct: 353 QLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIG 396
>gi|153792536 ATPase family, AAA domain containing 2B [Homo sapiens]
Length = 1458
Score = 53.1 bits (126), Expect = 5e-07
Identities = 41/137 (29%), Positives = 58/137 (42%), Gaps = 18/137 (13%)
Query: 224 RGYLLYGPPGCGKSSFITALAGELEH------------SICLLSLTDSSLSDDRLNHLLS 271
RG L YGPPG GK+ ALA E + CL S RL +
Sbjct: 435 RGCLFYGPPGTGKTLVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQA 494
Query: 272 VAPQQSLVLLEDVDAAFLSRDLAVENPVKYQGLGRLTFSGLLNALDGVASTEARIVFMTT 331
+ S++ +++D LA + + S LL +DG+ + +V T
Sbjct: 495 YLMRPSIIFFDEIDG------LAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEIVVIGAT 548
Query: 332 NHVDRLDPALIRPGRVD 348
N +D +DPAL RPGR D
Sbjct: 549 NRLDSIDPALRRPGRFD 565
>gi|113426932 PREDICTED: similar to N-ethylmaleimide-sensitive
factor [Homo sapiens]
Length = 563
Score = 52.0 bits (123), Expect = 1e-06
Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 30/164 (18%)
Query: 212 PKWYTDRGIPYRRGYLLYGPPGCGKS---------------------SFITALAGELEHS 250
P+ G + +G LLYGPPGCGK+ + GE E +
Sbjct: 315 PEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEAN 374
Query: 251 ICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVENPVKYQGLGRLTFS 310
I L D+ RL + +++ +++DA R + G+ +
Sbjct: 375 IRKL-FADAEEEQRRLGANSGL----HIIIFDEIDAICKQRGSMAGST----GVHDTVVN 425
Query: 311 GLLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLKEYVG 354
LL+ +DG+ +V TN D +D AL+RPGR+++K +G
Sbjct: 426 QLLSKIDGMEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIG 469
>gi|169167838 PREDICTED: similar to hCG2002932 [Homo sapiens]
Length = 415
Score = 50.4 bits (119), Expect = 3e-06
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 23/175 (13%)
Query: 185 RRPLNSVVLQQGLADRIVRDVQEFID----NPKWYTDRGIPYRRGYLLYGPPGCGKSSFI 240
+ P + V GL D +++++E ++ +P++Y + G +G +L GPP G ++F+
Sbjct: 165 KAPQETYVNTGGL-DNQIQEIKESMELPLPHPEYYEEMGTKPPKGVILCGPP--GTATFL 221
Query: 241 TALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQ--SLVLLEDVDAAFLSR---DLAV 295
+ EL L D + + VA + S++ ++++A R +
Sbjct: 222 RVVGSELIQKY----LGD---GPKLVRQVFQVAEEHAPSIMFTDEIEAIGTKRYDSNSGG 274
Query: 296 ENPVKYQGLGRLTFSGLLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLK 350
E ++ L LLN L G S E V M T V+ LDP LIRPGR+D K
Sbjct: 275 EREIQQTMLE----LELLNQLGGFDSREDVKVIMATKQVETLDPVLIRPGRIDKK 325
>gi|239748566 PREDICTED: similar to hCG2002932 [Homo sapiens]
Length = 415
Score = 50.4 bits (119), Expect = 3e-06
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 23/175 (13%)
Query: 185 RRPLNSVVLQQGLADRIVRDVQEFID----NPKWYTDRGIPYRRGYLLYGPPGCGKSSFI 240
+ P + V GL D +++++E ++ +P++Y + G +G +L GPP G ++F+
Sbjct: 165 KAPQETYVNTGGL-DNQIQEIKESMELPLPHPEYYEEMGTKPPKGVILCGPP--GTATFL 221
Query: 241 TALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQ--SLVLLEDVDAAFLSR---DLAV 295
+ EL L D + + VA + S++ ++++A R +
Sbjct: 222 RVVGSELIQKY----LGD---GPKLVRQVFQVAEEHAPSIMFTDEIEAIGTKRYDSNSGG 274
Query: 296 ENPVKYQGLGRLTFSGLLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLK 350
E ++ L LLN L G S E V M T V+ LDP LIRPGR+D K
Sbjct: 275 EREIQQTMLE----LELLNQLGGFDSREDVKVIMATKQVETLDPVLIRPGRIDKK 325
>gi|239742549 PREDICTED: hypothetical protein LOC345645 [Homo
sapiens]
Length = 415
Score = 50.4 bits (119), Expect = 3e-06
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 23/175 (13%)
Query: 185 RRPLNSVVLQQGLADRIVRDVQEFID----NPKWYTDRGIPYRRGYLLYGPPGCGKSSFI 240
+ P + V GL D +++++E ++ +P++Y + G +G +L GPP G ++F+
Sbjct: 165 KAPQETYVNTGGL-DNQIQEIKESMELPLPHPEYYEEMGTKPPKGVILCGPP--GTATFL 221
Query: 241 TALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQ--SLVLLEDVDAAFLSR---DLAV 295
+ EL L D + + VA + S++ ++++A R +
Sbjct: 222 RVVGSELIQKY----LGD---GPKLVRQVFQVAEEHAPSIMFTDEIEAIGTKRYDSNSGG 274
Query: 296 ENPVKYQGLGRLTFSGLLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLK 350
E ++ L LLN L G S E V M T V+ LDP LIRPGR+D K
Sbjct: 275 EREIQQTMLE----LELLNQLGGFDSREDVKVIMATKQVETLDPVLIRPGRIDKK 325
>gi|4505725 peroxin1 [Homo sapiens]
Length = 1283
Score = 50.4 bits (119), Expect = 3e-06
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Query: 212 PKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSIC-------LLSLTDSSLSDD 264
P+ + + I R G LLYGPPG GK+ +A E + L +S
Sbjct: 863 PELFANLPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAV 922
Query: 265 RLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVENPVKYQGLGRLTFSGLLNALDGVASTEA 324
R + + A + ++ ++ ++ +A G+ + LL LDGV +
Sbjct: 923 RDIFIRAQAAKPCILFFDEFES------IAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQG 976
Query: 325 RIVFMTTNHVDRLDPALIRPGRVD 348
V T+ D +DPAL+RPGR+D
Sbjct: 977 VYVLAATSRPDLIDPALLRPGRLD 1000
>gi|7019569 vacuolar protein sorting factor 4A [Homo sapiens]
Length = 437
Score = 47.8 bits (112), Expect = 2e-05
Identities = 64/242 (26%), Positives = 105/242 (43%), Gaps = 22/242 (9%)
Query: 189 NSVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELE 248
N V +G + + V I P +T + P+R G LL+GPPG GKS A+A E
Sbjct: 127 NDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWR-GILLFGPPGTGKSYLAKAVATEAN 185
Query: 249 HSICLLSLTDSSL-------SDDRLNHLLSVAPQQ--SLVLLEDVDAAFLSRDLAVENPV 299
+S S++ S L S+ + +L +A Q S++ +++VD+ SR+ EN
Sbjct: 186 NS-TFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRN---ENES 241
Query: 300 KYQGLGRLTFSGLLNALDGVA-STEARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSH 358
+ R + L + GV + + +V TN LD A+ R R + + Y+
Sbjct: 242 E---AARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEE 296
Query: 359 WQLTQMFQRFYPGQAP-SLAENFAEHVLRATNQISPAQVQGYFMLYKNDPVGAIHNAESL 417
QMF R + G P +L + + R T S A + PV + +A
Sbjct: 297 AARAQMF-RLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRKVQSATHF 355
Query: 418 RR 419
++
Sbjct: 356 KK 357
>gi|31377644 ATPase family, AAA domain containing 1 [Homo sapiens]
Length = 361
Score = 46.2 bits (108), Expect = 6e-05
Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 22/173 (12%)
Query: 187 PLNSVVLQQGLA--DRIVRDVQEFIDNP-----KWYTDRGIPYRRGYLLYGPPGCGKSSF 239
PLN V +A D ++ D+++ + P + R + +G LLYGPPGCGK+
Sbjct: 83 PLNMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKT-- 140
Query: 240 ITALAGELEHSICLLSLTDSSLSDDRLNH---------LLSVAPQQSLVLLEDVDAAFLS 290
+ A A E ++L S+L+D L++ Q S++ ++++D+ +
Sbjct: 141 LIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRN 200
Query: 291 RDLAVENPVKYQGLGRLTFSGLLNALDGVASTEARIVFMTTNHVDRLDPALIR 343
R + + + + F L + LD S + IV TN LD A++R
Sbjct: 201 RS---SSDHEATAMMKAQFMSLWDGLDTDHSCQV-IVMGATNRPQDLDSAIMR 249
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.138 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,881,929
Number of Sequences: 37866
Number of extensions: 681745
Number of successful extensions: 1652
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1553
Number of HSP's gapped (non-prelim): 81
length of query: 419
length of database: 18,247,518
effective HSP length: 105
effective length of query: 314
effective length of database: 14,271,588
effective search space: 4481278632
effective search space used: 4481278632
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.