Guide to the Human Genome
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Name: BCS1L Sequence: fasta or formatted (419aa) NCBI GI: 4757852
Description:

BCS1-like

Referenced in:

Oxidative Phosphorylation

Other entries for this name:
alt mRNA [419aa] BCS1-like
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         30           2
 C cysteine            0.7          3           1
 D aspartate           4.8         20           2
 E glutamate           5.5         23           2
 F phenylalanine       4.8         20           2
 G glycine             7.4         31           1
 H histidine           2.6         11           1
 I isoleucine          3.8         16           1
 K lysine              2.6         11           1
 L leucine            12.2         51           2
 M methionine          1.9          8           1
 N asparagine          3.1         13           1
 P proline             5.0         21           2
 Q glutamine           4.8         20           2
 R arginine            8.4         35           4
 S serine              6.9         29           2
 T threonine           5.5         23           2
 V valine              6.9         29           2
 W tryptophan          1.9          8           1
 Y tyrosine            4.1         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BCS1-like 
BCS1L                 1.000   BCS1-like 
PSMC1                 0.059   proteasome 26S ATPase subunit 1 
PSMC5                 0.055   proteasome 26S ATPase subunit 5 
NVL                   0.055   nuclear VCP-like isoform 2 
NVL                   0.055   nuclear VCP-like isoform 1 
AFG3L2                0.053   AFG3 ATPase family gene 3-like 2 
PSMC6                 0.053   proteasome 26S ATPase subunit 6 
YME1L1                0.053   YME1-like 1 isoform 1 
YME1L1                0.053   YME1-like 1 isoform 3 
SPG7                  0.052   spastic paraplegia 7 isoform 1 
SPATA5                0.047   spermatogenesis associated 5 
VCP                   0.046   valosin-containing protein 
PEX6                  0.044   peroxisomal biogenesis factor 6 
LOC652826             0.044   PREDICTED: similar to proteasome 26S ATPase subunit ...
PSMC4                 0.044   proteasome 26S ATPase subunit 4 isoform 2 
PSMC4                 0.044   proteasome 26S ATPase subunit 4 isoform 1 
SPATA5L1              0.041   spermatogenesis associated 5-like 1 
PSMC2                 0.041   proteasome 26S ATPase subunit 2 
PSMC3                 0.040   proteasome 26S ATPase subunit 3 
ATAD2                 0.035   ATPase family, AAA domain containing 2 
NSF                   0.034   vesicle-fusing ATPase 
ATAD2B                0.034   ATPase family, AAA domain containing 2B 
LOC728806             0.033   PREDICTED: similar to N-ethylmaleimide-sensitive fa...
LOC345645             0.030   PREDICTED: similar to hCG2002932 
LOC345645             0.030   PREDICTED: similar to hCG2002932 
LOC345645             0.030   PREDICTED: hypothetical protein LOC345645 
PEX1                  0.030   peroxin1 
VPS4A                 0.028   vacuolar protein sorting factor 4A 
ATAD1                 0.025   ATPase family, AAA domain containing 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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