PDLIM7 30450

Name: PDLIM7	Sequence: fasta or formatted (222aa)		NCBI GI: 47157328
Description: PDZ and LIM domain 7 isoform 4		Referenced in: LIM Domain Proteins
Other entries for this name: alt prot [457aa] PDZ and LIM domain 7 isoform 1 alt prot [423aa] PDZ and LIM domain 7 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.5 21 2 C cysteine 0.5 1 1 D aspartate 5.0 11 1 E glutamate 5.0 11 2 F phenylalanine 3.2 7 1 G glycine 7.7 17 2 H histidine 2.7 6 2 I isoleucine 2.3 5 1 K lysine 5.0 11 2 L leucine 9.0 20 1 M methionine 1.4 3 1 N asparagine 3.2 7 1 P proline 9.9 22 3 Q glutamine 6.8 15 2 R arginine 8.1 18 1 S serine 8.6 19 1 T threonine 4.1 9 1 V valine 5.4 12 2 W tryptophan 1.8 4 1 Y tyrosine 1.4 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PDZ and LIM domain 7 isoform 4 PDLIM7 0.849 PDZ and LIM domain 7 isoform 1 PDLIM7 0.623 PDZ and LIM domain 7 isoform 2 PDLIM5 0.430 PDZ and LIM domain 5 isoform e PDLIM5 0.430 PDZ and LIM domain 5 isoform d LDB3 0.351 LIM domain binding 3 isoform 4 PDLIM5 0.347 PDZ and LIM domain 5 isoform b LDB3 0.267 LIM domain binding 3 isoform 2 PDLIM5 0.230 PDZ and LIM domain 5 isoform a LDB3 0.207 LIM domain binding 3 isoform 3 LDB3 0.207 LIM domain binding 3 isoform 1 PDLIM1 0.193 PDZ and LIM domain 1 PDLIM3 0.170 PDZ and LIM domain protein 3 isoform b PDLIM4 0.170 PDZ and LIM domain 4 isoform 2 PDLIM4 0.170 PDZ and LIM domain 4 isoform 1 PDLIM3 0.165 PDZ and LIM domain protein 3 isoform a PDLIM2 0.126 PDZ and LIM domain 2 isoform 3 PDLIM2 0.126 PDZ and LIM domain 2 isoform 1 PDLIM2 0.126 PDZ and LIM domain 2 isoform 2 SYNPO2L 0.093 synaptopodin 2-like isoform a MAGI2 0.086 membrane associated guanylate kinase, WW and PDZ dom... SYNPO2 0.079 synaptopodin 2 isoform c SYNPO2 0.079 synaptopodin 2 isoform b SYNPO2 0.079 synaptopodin 2 isoform a MAGIX 0.070 MAGI family member, X-linked isoform b MAGIX 0.070 MAGI family member, X-linked isoform a MAGI3 0.067 membrane-associated guanylate kinase-related 3 iso... MAGI3 0.067 membrane-associated guanylate kinase-related 3 iso... MAGI1 0.067 membrane associated guanylate kinase, WW and PDZ dom... MAGI1 0.067 membrane associated guanylate kinase, WW and PDZ dom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.