PDLIM2 24863

Name: PDLIM2	Sequence: fasta or formatted (366aa)		NCBI GI: 28866957
Description: PDZ and LIM domain 2 isoform 1		Referenced in: LIM Domain Proteins
Other entries for this name: alt prot [352aa] PDZ and LIM domain 2 isoform 2 alt prot [278aa] PDZ and LIM domain 2 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.8 36 2 C cysteine 1.9 7 1 D aspartate 4.1 15 1 E glutamate 6.3 23 2 F phenylalanine 2.5 9 1 G glycine 8.7 32 2 H histidine 1.4 5 1 I isoleucine 2.7 10 2 K lysine 2.7 10 1 L leucine 9.3 34 3 M methionine 2.5 9 1 N asparagine 1.4 5 1 P proline 8.5 31 3 Q glutamine 4.4 16 1 R arginine 9.6 35 2 S serine 14.2 52 4 T threonine 4.6 17 1 V valine 3.3 12 1 W tryptophan 0.8 3 1 Y tyrosine 1.4 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PDZ and LIM domain 2 isoform 1 PDLIM2 0.889 PDZ and LIM domain 2 isoform 2 PDLIM2 0.671 PDZ and LIM domain 2 isoform 3 PDLIM1 0.209 PDZ and LIM domain 1 PDLIM4 0.181 PDZ and LIM domain 4 isoform 1 PDLIM3 0.164 PDZ and LIM domain protein 3 isoform a PDLIM3 0.159 PDZ and LIM domain protein 3 isoform b PDLIM4 0.127 PDZ and LIM domain 4 isoform 2 LDB3 0.097 LIM domain binding 3 isoform 1 LDB3 0.092 LIM domain binding 3 isoform 3 PDLIM5 0.092 PDZ and LIM domain 5 isoform a PDLIM5 0.087 PDZ and LIM domain 5 isoform e PDLIM5 0.087 PDZ and LIM domain 5 isoform d PDLIM5 0.087 PDZ and LIM domain 5 isoform b PDLIM7 0.083 PDZ and LIM domain 7 isoform 1 PDLIM7 0.081 PDZ and LIM domain 7 isoform 2 LDB3 0.080 LIM domain binding 3 isoform 4 LDB3 0.080 LIM domain binding 3 isoform 2 PDLIM7 0.077 PDZ and LIM domain 7 isoform 4 SYNPO2L 0.063 synaptopodin 2-like isoform a MAGI2 0.053 membrane associated guanylate kinase, WW and PDZ dom... MAGIX 0.050 MAGI family member, X-linked isoform b MAGIX 0.047 MAGI family member, X-linked isoform a MAGI1 0.046 membrane associated guanylate kinase, WW and PDZ dom... SHROOM3 0.043 shroom family member 3 protein SYNPO2 0.041 synaptopodin 2 isoform c SYNPO2 0.041 synaptopodin 2 isoform b SYNPO2 0.041 synaptopodin 2 isoform a SHROOM2 0.038 apical protein of Xenopus-like MAST2 0.037 microtubule associated serine/threonine kinase 2 [H... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.