PDLIM7 28096

Name: PDLIM7	Sequence: fasta or formatted (423aa)		NCBI GI: 42741675
Description: PDZ and LIM domain 7 isoform 2		Referenced in: LIM Domain Proteins
Other entries for this name: alt prot [457aa] PDZ and LIM domain 7 isoform 1 alt prot [222aa] PDZ and LIM domain 7 isoform 4
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 36 3 C cysteine 4.5 19 1 D aspartate 4.3 18 1 E glutamate 5.9 25 2 F phenylalanine 4.5 19 2 G glycine 8.3 35 3 H histidine 3.5 15 1 I isoleucine 3.3 14 1 K lysine 6.6 28 3 L leucine 5.9 25 1 M methionine 1.7 7 1 N asparagine 1.9 8 2 P proline 9.0 38 2 Q glutamine 4.5 19 1 R arginine 5.7 24 1 S serine 6.6 28 2 T threonine 5.9 25 1 V valine 5.7 24 2 W tryptophan 1.7 7 1 Y tyrosine 2.1 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PDZ and LIM domain 7 isoform 2 PDLIM7 0.968 PDZ and LIM domain 7 isoform 1 PDLIM5 0.443 PDZ and LIM domain 5 isoform b PDLIM5 0.339 PDZ and LIM domain 5 isoform a PDLIM7 0.306 PDZ and LIM domain 7 isoform 4 LDB3 0.304 LIM domain binding 3 isoform 2 LDB3 0.304 LIM domain binding 3 isoform 1 PDLIM5 0.173 PDZ and LIM domain 5 isoform e PDLIM5 0.162 PDZ and LIM domain 5 isoform d TGFB1I1 0.160 transforming growth factor beta 1 induced transcrip... TGFB1I1 0.160 transforming growth factor beta 1 induced transcript... LPXN 0.126 leupaxin isoform 1 LPXN 0.126 leupaxin isoform 2 PXN 0.121 paxillin isoform 3 PXN 0.121 paxillin isoform 2 PXN 0.121 paxillin isoform 1 LIMS2 0.121 LIM and senescent cell antigen-like domains 2 isofo... LIMS2 0.121 LIM and senescent cell antigen-like domains 2 isofo... LIMS2 0.121 LIM and senescent cell antigen-like domains 2 isofo... LIMS2 0.121 LIM and senescent cell antigen-like domains 2 isofor... LIMS1 0.117 LIM and senescent cell antigen-like domains 1 PDLIM1 0.112 PDZ and LIM domain 1 PDLIM4 0.111 PDZ and LIM domain 4 isoform 1 PDLIM3 0.107 PDZ and LIM domain protein 3 isoform b LDB3 0.103 LIM domain binding 3 isoform 3 FHL3 0.103 four and a half LIM domains 3 LDB3 0.102 LIM domain binding 3 isoform 4 ABLIM3 0.098 actin binding LIM protein family, member 3 FHL1 0.096 four and a half LIM domains 1 isoform 2 FHL1 0.096 four and a half LIM domains 1 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.