LDB3 2484

Name: LDB3	Sequence: fasta or formatted (617aa)		NCBI GI: 122056614
Description: LIM domain binding 3 isoform 2		Referenced in: LIM Domain Proteins Muscle
Other entries for this name: alt prot [330aa] LIM domain binding 3 isoform 3 alt prot [283aa] LIM domain binding 3 isoform 4 alt prot [727aa] LIM domain binding 3 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.5 65 2 C cysteine 3.1 19 1 D aspartate 3.9 24 2 E glutamate 4.1 25 2 F phenylalanine 3.6 22 2 G glycine 5.5 34 2 H histidine 2.6 16 1 I isoleucine 3.9 24 2 K lysine 4.9 30 2 L leucine 5.0 31 1 M methionine 1.8 11 1 N asparagine 3.6 22 2 P proline 11.5 71 2 Q glutamine 4.7 29 1 R arginine 3.9 24 2 S serine 9.9 61 2 T threonine 7.3 45 2 V valine 5.3 33 3 W tryptophan 1.0 6 1 Y tyrosine 4.1 25 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LIM domain binding 3 isoform 2 LDB3 0.841 LIM domain binding 3 isoform 1 LDB3 0.375 LIM domain binding 3 isoform 4 PDLIM5 0.319 PDZ and LIM domain 5 isoform a PDLIM5 0.311 PDZ and LIM domain 5 isoform b LDB3 0.256 LIM domain binding 3 isoform 3 PDLIM7 0.216 PDZ and LIM domain 7 isoform 2 PDLIM7 0.211 PDZ and LIM domain 7 isoform 1 TGFB1I1 0.117 transforming growth factor beta 1 induced transcrip... TGFB1I1 0.117 transforming growth factor beta 1 induced transcript... PXN 0.108 paxillin isoform 3 PXN 0.108 paxillin isoform 2 LPXN 0.106 leupaxin isoform 1 LPXN 0.106 leupaxin isoform 2 PXN 0.103 paxillin isoform 1 PDLIM7 0.091 PDZ and LIM domain 7 isoform 4 PDLIM5 0.087 PDZ and LIM domain 5 isoform d PDLIM3 0.084 PDZ and LIM domain protein 3 isoform a PDLIM1 0.083 PDZ and LIM domain 1 PDLIM3 0.077 PDZ and LIM domain protein 3 isoform b FHL3 0.075 four and a half LIM domains 3 PDLIM5 0.073 PDZ and LIM domain 5 isoform e FBLIM1 0.070 filamin-binding LIM protein-1 isoform a FHL2 0.069 four and a half LIM domains 2 FHL2 0.069 four and a half LIM domains 2 FHL2 0.069 four and a half LIM domains 2 FHL2 0.069 four and a half LIM domains 2 FHL1 0.069 four and a half LIM domains 1 isoform 2 FHL1 0.069 four and a half LIM domains 1 isoform 2 FHL1 0.069 four and a half LIM domains 1 isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.