Guide to the Human Genome
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Name: MAGIX Sequence: fasta or formatted (262aa) NCBI GI: 153070254
Description:

MAGI family member, X-linked isoform b

Referenced in:

PDZ Domain

Other entries for this name:
alt prot [258aa] MAGI family member, X-linked isoform c
alt prot [253aa] MAGI family member, X-linked isoform d
alt prot [334aa] MAGI family member, X-linked isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         23           3
 C cysteine            0.8          2           1
 D aspartate           5.0         13           1
 E glutamate           5.7         15           2
 F phenylalanine       1.1          3           1
 G glycine            11.8         31           3
 H histidine           3.8         10           1
 I isoleucine          2.3          6           1
 K lysine              2.7          7           2
 L leucine             8.8         23           2
 M methionine          0.8          2           1
 N asparagine          1.1          3           1
 P proline            11.5         30           2
 Q glutamine           3.8         10           1
 R arginine            9.9         26           3
 S serine              8.8         23           3
 T threonine           5.0         13           2
 V valine              7.3         19           1
 W tryptophan          0.4          1           1
 Y tyrosine            0.8          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   MAGI family member, X-linked isoform b 
MAGIX                 0.909   MAGI family member, X-linked isoform a 
MAGIX                 0.614   MAGI family member, X-linked isoform d 
MAGIX                 0.602   MAGI family member, X-linked isoform c 
MAGI1                 0.140   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.122   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.122   membrane associated guanylate kinase, WW and PDZ dom...
MAGI2                 0.118   membrane associated guanylate kinase, WW and PDZ dom...
MAGI3                 0.106   membrane-associated guanylate kinase-related  3 iso...
MAGI3                 0.106   membrane-associated guanylate kinase-related  3 iso...
TJP1                  0.073   tight junction protein 1 isoform b 
TJP1                  0.073   tight junction protein 1 isoform a 
GRIP2                 0.073   glutamate receptor interacting protein 2 
PDLIM5                0.073   PDZ and LIM domain 5 isoform a 
PDLIM7                0.071   PDZ and LIM domain 7 isoform 2 
RADIL                 0.069   Rap GTPase interactor 
PDLIM2                0.069   PDZ and LIM domain 2 isoform 3 
PDLIM2                0.069   PDZ and LIM domain 2 isoform 1 
PDLIM2                0.069   PDZ and LIM domain 2 isoform 2 
PTPN13                0.067   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.067   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.067   protein tyrosine phosphatase, non-receptor type 13 is...
DLG2                  0.065   chapsyn-110 isoform 1 
DLG2                  0.065   chapsyn-110 isoform 2 
SYNJ2BP               0.065   synaptojanin 2 binding protein 
PDZD2                 0.063   PDZ domain containing 2 
DLG3                  0.061   synapse-associated protein 102 isoform a 
PTPN13                0.061   protein tyrosine phosphatase, non-receptor type 13 i...
IL16                  0.061   interleukin 16 isoform 2 
DLG2                  0.061   chapsyn-110 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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