PDLIM7 1447

Name: PDLIM7	Sequence: fasta or formatted (457aa)		NCBI GI: 11496885
Description: PDZ and LIM domain 7 isoform 1		Referenced in: LIM Domain Proteins
Other entries for this name: alt prot [423aa] PDZ and LIM domain 7 isoform 2 alt prot [222aa] PDZ and LIM domain 7 isoform 4
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.8 45 3 C cysteine 4.2 19 1 D aspartate 4.2 19 1 E glutamate 5.5 25 2 F phenylalanine 4.6 21 2 G glycine 8.1 37 3 H histidine 3.3 15 1 I isoleucine 3.1 14 1 K lysine 6.1 28 3 L leucine 5.7 26 1 M methionine 1.5 7 1 N asparagine 2.2 10 2 P proline 10.1 46 3 Q glutamine 4.4 20 2 R arginine 5.7 26 1 S serine 7.0 32 2 T threonine 5.7 26 1 V valine 5.3 24 2 W tryptophan 1.5 7 1 Y tyrosine 2.2 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PDZ and LIM domain 7 isoform 1 PDLIM7 0.897 PDZ and LIM domain 7 isoform 2 PDLIM5 0.425 PDZ and LIM domain 5 isoform b PDLIM7 0.387 PDZ and LIM domain 7 isoform 4 PDLIM5 0.318 PDZ and LIM domain 5 isoform a LDB3 0.315 LIM domain binding 3 isoform 2 LDB3 0.291 LIM domain binding 3 isoform 1 PDLIM5 0.154 PDZ and LIM domain 5 isoform e PDLIM5 0.154 PDZ and LIM domain 5 isoform d TGFB1I1 0.150 transforming growth factor beta 1 induced transcrip... TGFB1I1 0.150 transforming growth factor beta 1 induced transcript... LDB3 0.123 LIM domain binding 3 isoform 4 LPXN 0.117 leupaxin isoform 1 LPXN 0.117 leupaxin isoform 2 PXN 0.112 paxillin isoform 3 PXN 0.112 paxillin isoform 2 PXN 0.112 paxillin isoform 1 LIMS2 0.112 LIM and senescent cell antigen-like domains 2 isofo... LIMS2 0.112 LIM and senescent cell antigen-like domains 2 isofo... LIMS2 0.112 LIM and senescent cell antigen-like domains 2 isofo... LIMS2 0.112 LIM and senescent cell antigen-like domains 2 isofor... LIMS1 0.108 LIM and senescent cell antigen-like domains 1 PDLIM1 0.105 PDZ and LIM domain 1 PDLIM4 0.101 PDZ and LIM domain 4 isoform 1 PDLIM3 0.101 PDZ and LIM domain protein 3 isoform b FHL3 0.095 four and a half LIM domains 3 LDB3 0.094 LIM domain binding 3 isoform 3 ABLIM3 0.091 actin binding LIM protein family, member 3 FHL1 0.089 four and a half LIM domains 1 isoform 2 FHL1 0.089 four and a half LIM domains 1 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.