LDB3 30033

Name: LDB3	Sequence: fasta or formatted (727aa)		NCBI GI: 45592959
Description: LIM domain binding 3 isoform 1		Referenced in: LIM Domain Proteins Muscle
Other entries for this name: alt prot [617aa] LIM domain binding 3 isoform 2 alt prot [330aa] LIM domain binding 3 isoform 3 alt prot [283aa] LIM domain binding 3 isoform 4
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.1 88 3 C cysteine 2.8 20 1 D aspartate 3.3 24 2 E glutamate 4.1 30 2 F phenylalanine 3.2 23 2 G glycine 5.6 41 2 H histidine 2.2 16 1 I isoleucine 2.9 21 1 K lysine 4.0 29 2 L leucine 5.9 43 2 M methionine 1.7 12 1 N asparagine 2.9 21 2 P proline 13.5 98 2 Q glutamine 4.0 29 1 R arginine 4.4 32 2 S serine 11.1 81 2 T threonine 7.7 56 2 V valine 4.4 32 2 W tryptophan 0.8 6 1 Y tyrosine 3.4 25 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LIM domain binding 3 isoform 1 LDB3 0.631 LIM domain binding 3 isoform 2 LDB3 0.384 LIM domain binding 3 isoform 3 LDB3 0.217 LIM domain binding 3 isoform 4 PDLIM5 0.202 PDZ and LIM domain 5 isoform a PDLIM5 0.200 PDZ and LIM domain 5 isoform b PDLIM7 0.186 PDZ and LIM domain 7 isoform 1 PDLIM7 0.180 PDZ and LIM domain 7 isoform 2 TGFB1I1 0.100 transforming growth factor beta 1 induced transcrip... TGFB1I1 0.100 transforming growth factor beta 1 induced transcript... PXN 0.093 paxillin isoform 2 PXN 0.092 paxillin isoform 3 LPXN 0.091 leupaxin isoform 1 LPXN 0.091 leupaxin isoform 2 PXN 0.088 paxillin isoform 1 PDLIM5 0.064 PDZ and LIM domain 5 isoform e FHL3 0.064 four and a half LIM domains 3 PDLIM5 0.062 PDZ and LIM domain 5 isoform d PDLIM1 0.062 PDZ and LIM domain 1 PDLIM3 0.060 PDZ and LIM domain protein 3 isoform a PDLIM7 0.060 PDZ and LIM domain 7 isoform 4 FBLIM1 0.060 filamin-binding LIM protein-1 isoform a FHL2 0.059 four and a half LIM domains 2 FHL2 0.059 four and a half LIM domains 2 FHL2 0.059 four and a half LIM domains 2 FHL2 0.059 four and a half LIM domains 2 FHL1 0.059 four and a half LIM domains 1 isoform 2 FHL1 0.059 four and a half LIM domains 1 isoform 2 FHL1 0.059 four and a half LIM domains 1 isoform 3 FHL1 0.059 four and a half LIM domains 1 isoform 5 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.