SYNPO2L 6907

Name: SYNPO2L	Sequence: fasta or formatted (977aa)		NCBI GI: 166706868
Description: synaptopodin 2-like isoform a		Referenced in: Synapses
Other entries for this name: alt prot [753aa] synaptopodin 2-like isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.4 111 3 C cysteine 0.5 5 1 D aspartate 2.8 27 1 E glutamate 5.7 56 3 F phenylalanine 2.4 23 2 G glycine 8.4 82 3 H histidine 1.2 12 1 I isoleucine 2.0 20 1 K lysine 3.3 32 2 L leucine 8.1 79 3 M methionine 1.3 13 1 N asparagine 1.5 15 1 P proline 17.1 167 3 Q glutamine 5.1 50 2 R arginine 7.5 73 3 S serine 9.8 96 2 T threonine 5.8 57 3 V valine 4.2 41 2 W tryptophan 0.6 6 1 Y tyrosine 1.2 12 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 synaptopodin 2-like isoform a SYNPO2L 0.733 synaptopodin 2-like isoform b SYNPO2 0.166 synaptopodin 2 isoform b SYNPO2 0.161 synaptopodin 2 isoform c SYNPO2 0.161 synaptopodin 2 isoform a SYNPO 0.066 synaptopodin isoform B SYNPO 0.062 synaptopodin isoform A NACA 0.046 nascent polypeptide-associated complex alpha subuni... FLJ22184 0.039 PREDICTED: hypothetical protein FLJ22184 PRG4 0.038 proteoglycan 4 isoform D PRG4 0.038 proteoglycan 4 isoform C PRG4 0.038 proteoglycan 4 isoform B PRG4 0.038 proteoglycan 4 isoform A MLL2 0.035 myeloid/lymphoid or mixed-lineage leukemia 2 ATN1 0.035 atrophin-1 ATN1 0.035 atrophin-1 FMN2 0.034 formin 2 FLJ22184 0.033 PREDICTED: hypothetical protein FLJ22184 SRCAP 0.033 Snf2-related CBP activator protein RAPH1 0.032 Ras association and pleckstrin homology domains 1 is... CASKIN1 0.032 CASK interacting protein 1 FLJ22184 0.031 PREDICTED: hypothetical protein LOC80164 PRB2 0.029 proline-rich protein BstNI subfamily 2 BAT2 0.028 HLA-B associated transcript-2 C6orf132 0.028 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.028 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.028 PREDICTED: hypothetical protein LOC647024 MYO15A 0.027 myosin XV KIAA1522 0.027 hypothetical protein LOC57648 MUC2 0.027 mucin 2 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.