Guide to the Human Genome
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Name: MAGI3 Sequence: fasta or formatted (1125aa) NCBI GI: 155969695
Description:

membrane-associated guanylate kinase-related 3 isoform 2

Referenced in:

PDZ Domain
WW Domain

Other entries for this name:
alt prot [1481aa] membrane-associated guanylate kinase-related  3 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         59           2
 C cysteine            1.2         14           2
 D aspartate           6.4         72           2
 E glutamate           6.8         76           4
 F phenylalanine       2.9         33           1
 G glycine             9.6        108           3
 H histidine           2.7         30           2
 I isoleucine          5.4         61           2
 K lysine              6.8         77           4
 L leucine             7.9         89           4
 M methionine          2.0         22           2
 N asparagine          4.0         45           1
 P proline             7.8         88           3
 Q glutamine           4.9         55           2
 R arginine            4.8         54           2
 S serine              6.7         75           2
 T threonine           5.1         57           3
 V valine              6.8         76           2
 W tryptophan          0.7          8           1
 Y tyrosine            2.3         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   membrane-associated guanylate kinase-related  3 iso... 
MAGI3                 0.986   membrane-associated guanylate kinase-related  3 iso...
MAGI2                 0.475   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.401   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.398   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.396   membrane associated guanylate kinase, WW and PDZ dom...
MPDZ                  0.043   multiple PDZ domain protein 
INADL                 0.039   InaD-like 
DLG2                  0.038   chapsyn-110 isoform 3 
DLG1                  0.036   discs, large homolog 1 isoform 1 
DLG1                  0.036   discs, large homolog 1 isoform 2 
PTPN13                0.035   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.035   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.035   protein tyrosine phosphatase, non-receptor type 13 is...
SCRIB                 0.033   scribble isoform b 
SCRIB                 0.033   scribble isoform a 
PTPN13                0.033   protein tyrosine phosphatase, non-receptor type 13 i...
DLG3                  0.031   synapse-associated protein 102 isoform a 
WWC2                  0.029   WW and C2 domain containing 2 
PDZK1                 0.027   PDZ domain containing 1 
PARD3                 0.027   partitioning-defective protein 3 homolog 
WWC1                  0.027   WW and C2 domain containing 1 isoform 3 
WWC1                  0.027   WW and C2 domain containing 1 isoform 2 
WWC1                  0.027   WW and C2 domain containing 1 isoform 1 
FRMPD2                0.025   FERM and PDZ domain containing 2 isoform 1 
FRMPD2                0.025   FERM and PDZ domain containing 2 isoform 3 
LNX2                  0.025   ligand of numb-protein X 2 
MAGIX                 0.024   MAGI family member, X-linked isoform b 
MAGIX                 0.024   MAGI family member, X-linked isoform a 
PDZD2                 0.023   PDZ domain containing 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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