PDLIM2 13059

Name: PDLIM2	Sequence: fasta or formatted (352aa)		NCBI GI: 21361888
Description: PDZ and LIM domain 2 isoform 2		Referenced in: LIM Domain Proteins
Other entries for this name: alt prot [366aa] PDZ and LIM domain 2 isoform 1 alt prot [278aa] PDZ and LIM domain 2 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.2 36 2 C cysteine 2.0 7 1 D aspartate 4.0 14 1 E glutamate 5.7 20 2 F phenylalanine 2.6 9 1 G glycine 8.5 30 2 H histidine 1.7 6 1 I isoleucine 2.6 9 2 K lysine 2.6 9 1 L leucine 9.4 33 3 M methionine 1.7 6 1 N asparagine 1.4 5 1 P proline 8.5 30 3 Q glutamine 4.5 16 1 R arginine 8.8 31 1 S serine 15.1 53 4 T threonine 4.8 17 1 V valine 3.4 12 1 W tryptophan 0.6 2 1 Y tyrosine 2.0 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PDZ and LIM domain 2 isoform 2 PDLIM2 0.926 PDZ and LIM domain 2 isoform 1 PDLIM2 0.699 PDZ and LIM domain 2 isoform 3 PDLIM1 0.256 PDZ and LIM domain 1 PDLIM4 0.215 PDZ and LIM domain 4 isoform 1 PDLIM3 0.201 PDZ and LIM domain protein 3 isoform a PDLIM3 0.196 PDZ and LIM domain protein 3 isoform b PDLIM4 0.132 PDZ and LIM domain 4 isoform 2 LDB3 0.101 LIM domain binding 3 isoform 1 LDB3 0.096 LIM domain binding 3 isoform 3 PDLIM5 0.096 PDZ and LIM domain 5 isoform a PDLIM5 0.092 PDZ and LIM domain 5 isoform b PDLIM5 0.090 PDZ and LIM domain 5 isoform e PDLIM5 0.090 PDZ and LIM domain 5 isoform d PDLIM7 0.089 PDZ and LIM domain 7 isoform 1 PDLIM7 0.087 PDZ and LIM domain 7 isoform 2 LDB3 0.083 LIM domain binding 3 isoform 4 LDB3 0.083 LIM domain binding 3 isoform 2 PDLIM7 0.080 PDZ and LIM domain 7 isoform 4 SYNPO2L 0.065 synaptopodin 2-like isoform a MAGI2 0.055 membrane associated guanylate kinase, WW and PDZ dom... MAGIX 0.052 MAGI family member, X-linked isoform b MAGIX 0.049 MAGI family member, X-linked isoform a MAGI1 0.047 membrane associated guanylate kinase, WW and PDZ dom... SHROOM3 0.044 shroom family member 3 protein SYNPO2 0.043 synaptopodin 2 isoform c SYNPO2 0.043 synaptopodin 2 isoform b SYNPO2 0.043 synaptopodin 2 isoform a SHROOM2 0.040 apical protein of Xenopus-like MAST2 0.039 microtubule associated serine/threonine kinase 2 [H... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.