| Name: PDZD4 | Sequence: fasta or formatted (769aa) | NCBI GI: 46559761 | |
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Description: PDZ domain containing 4
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 6.6 51 4 C cysteine 1.3 10 1 D aspartate 5.7 44 3 E glutamate 10.8 83 3 F phenylalanine 1.4 11 1 G glycine 7.8 60 3 H histidine 2.3 18 1 I isoleucine 3.0 23 2 K lysine 5.5 42 2 L leucine 10.7 82 2 M methionine 2.7 21 2 N asparagine 3.8 29 1 P proline 6.4 49 3 Q glutamine 4.3 33 2 R arginine 9.1 70 2 S serine 7.9 61 2 T threonine 3.6 28 2 V valine 4.3 33 2 W tryptophan 0.7 5 1 Y tyrosine 2.1 16 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PDZ domain containing 4 PDZRN3 0.459 PDZ domain containing ring finger 3 PDZRN4 0.431 PDZ domain containing RING finger 4 MPDZ 0.019 multiple PDZ domain protein INADL 0.019 InaD-like PARD3B 0.018 par-3 partitioning defective 3 homolog B isoform b ... PARD3B 0.018 par-3 partitioning defective 3 homolog B isoform a ... PARD3B 0.018 par-3 partitioning defective 3 homolog B isoform c ... LNX2 0.018 ligand of numb-protein X 2 DLG3 0.017 synapse-associated protein 102 isoform a PARD3 0.017 partitioning-defective protein 3 homolog DVL1 0.016 dishevelled 1 SYNJ2BP 0.016 synaptojanin 2 binding protein DLG2 0.016 chapsyn-110 isoform 3 DLG2 0.016 chapsyn-110 isoform 1 DLG2 0.016 chapsyn-110 isoform 2 DLG1 0.016 discs, large homolog 1 isoform 1 DLG1 0.016 discs, large homolog 1 isoform 2 TJP1 0.015 tight junction protein 1 isoform b TJP1 0.015 tight junction protein 1 isoform a DLG4 0.015 post-synaptic density protein 95 isoform 1 DLG4 0.015 post-synaptic density protein 95 isoform 2 LNX1 0.015 ligand of numb-protein X 1 isoform a LNX1 0.015 ligand of numb-protein X 1 isoform b DVL3 0.015 dishevelled 3 DLG5 0.014 discs large homolog 5 PDZD2 0.014 PDZ domain containing 2 PTPN13 0.014 protein tyrosine phosphatase, non-receptor type 13 i... PTPN13 0.014 protein tyrosine phosphatase, non-receptor type 13 i... PTPN13 0.014 protein tyrosine phosphatase, non-receptor type 13 i...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
