LNX1 10014

Name: LNX1	Sequence: fasta or formatted (632aa)		NCBI GI: 187607071
Description: ligand of numb-protein X 1 isoform b		Referenced in: PDZ Domain Ring Finger Proteins
Other entries for this name: alt prot [728aa] ligand of numb-protein X 1 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 41 3 C cysteine 1.7 11 1 D aspartate 5.4 34 2 E glutamate 5.9 37 2 F phenylalanine 2.1 13 2 G glycine 7.9 50 2 H histidine 2.7 17 1 I isoleucine 6.5 41 3 K lysine 4.0 25 2 L leucine 9.5 60 4 M methionine 1.3 8 1 N asparagine 5.1 32 2 P proline 6.5 41 2 Q glutamine 2.5 16 1 R arginine 7.9 50 2 S serine 9.3 59 3 T threonine 4.1 26 2 V valine 7.3 46 2 W tryptophan 1.4 9 1 Y tyrosine 2.5 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ligand of numb-protein X 1 isoform b LNX1 0.952 ligand of numb-protein X 1 isoform a LNX2 0.367 ligand of numb-protein X 2 MPDZ 0.147 multiple PDZ domain protein INADL 0.103 InaD-like DLG3 0.069 synapse-associated protein 102 isoform a DLG1 0.062 discs, large homolog 1 isoform 1 DLG1 0.062 discs, large homolog 1 isoform 2 SCRIB 0.061 scribble isoform b SCRIB 0.061 scribble isoform a DLG4 0.058 post-synaptic density protein 95 isoform 1 DLG4 0.058 post-synaptic density protein 95 isoform 2 DLG2 0.056 chapsyn-110 isoform 3 FRMPD2 0.054 FERM and PDZ domain containing 2 isoform 1 FRMPD2 0.054 FERM and PDZ domain containing 2 isoform 3 DLG2 0.047 chapsyn-110 isoform 1 DLG2 0.047 chapsyn-110 isoform 2 PARD3 0.045 partitioning-defective protein 3 homolog PARD3B 0.044 par-3 partitioning defective 3 homolog B isoform a ... PARD3B 0.044 par-3 partitioning defective 3 homolog B isoform c ... PDZD2 0.043 PDZ domain containing 2 PTPN13 0.042 protein tyrosine phosphatase, non-receptor type 13 is... GRIP2 0.042 glutamate receptor interacting protein 2 PTPN13 0.042 protein tyrosine phosphatase, non-receptor type 13 i... PTPN13 0.040 protein tyrosine phosphatase, non-receptor type 13 i... GRIP1 0.039 glutamate receptor interacting protein 1 MAGI3 0.037 membrane-associated guanylate kinase-related 3 iso... MAGI3 0.037 membrane-associated guanylate kinase-related 3 iso... PTPN13 0.035 protein tyrosine phosphatase, non-receptor type 13 i... MAGI1 0.034 membrane associated guanylate kinase, WW and PDZ dom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.