Guide to the Human Genome
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Name: INADL Sequence: fasta or formatted (1801aa) NCBI GI: 112382257
Description:

InaD-like

Referenced in:

PDZ Domain

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9        107           3
 C cysteine            0.8         14           2
 D aspartate           6.3        114           3
 E glutamate           8.3        149           3
 F phenylalanine       2.4         43           1
 G glycine             8.0        144           2
 H histidine           2.2         40           2
 I isoleucine          5.9        107           2
 K lysine              4.7         85           2
 L leucine             9.4        169           2
 M methionine          1.6         28           1
 N asparagine          4.7         84           2
 P proline             5.9        107           3
 Q glutamine           5.3         96           2
 R arginine            4.5         81           2
 S serine              8.6        155           3
 T threonine           5.2         94           2
 V valine              7.8        141           3
 W tryptophan          0.5          9           1
 Y tyrosine            1.9         34           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   InaD-like 
MPDZ                  0.333   multiple PDZ domain protein 
LNX2                  0.046   ligand of numb-protein X 2 
LNX1                  0.037   ligand of numb-protein X 1 isoform a 
LNX1                  0.037   ligand of numb-protein X 1 isoform b 
SCRIB                 0.035   scribble isoform b 
SCRIB                 0.035   scribble isoform a 
DLG1                  0.032   discs, large homolog 1 isoform 1 
DLG1                  0.032   discs, large homolog 1 isoform 2 
DLG4                  0.031   post-synaptic density protein 95 isoform 1 
DLG4                  0.031   post-synaptic density protein 95 isoform 2 
DLG2                  0.030   chapsyn-110 isoform 3 
DLG3                  0.027   synapse-associated protein 102 isoform a 
DLG2                  0.027   chapsyn-110 isoform 1 
DLG2                  0.027   chapsyn-110 isoform 2 
PDZD2                 0.027   PDZ domain containing 2 
MAGI1                 0.027   membrane associated guanylate kinase, WW and PDZ dom...
MAGI3                 0.025   membrane-associated guanylate kinase-related  3 iso...
MAGI3                 0.025   membrane-associated guanylate kinase-related  3 iso...
MAGI1                 0.025   membrane associated guanylate kinase, WW and PDZ dom...
GRIP1                 0.025   glutamate receptor interacting protein 1 
MAGI1                 0.024   membrane associated guanylate kinase, WW and PDZ dom...
PTPN13                0.024   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.024   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.024   protein tyrosine phosphatase, non-receptor type 13 is...
PARD3                 0.023   partitioning-defective protein 3 homolog 
GRIP2                 0.023   glutamate receptor interacting protein 2 
PARD3B                0.023   par-3 partitioning defective 3 homolog B isoform a ...
PARD3B                0.023   par-3 partitioning defective 3 homolog B isoform c ...
PTPN13                0.022   protein tyrosine phosphatase, non-receptor type 13 i...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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