Guide to the Human Genome
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Name: DLG1 Sequence: fasta or formatted (926aa) NCBI GI: 148539578
Description:

discs, large homolog 1 isoform 2

Referenced in:

Kinesins
PDZ Domain
Synapses

Other entries for this name:
alt prot [904aa] discs, large homolog 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         50           4
 C cysteine            0.5          5           1
 D aspartate           6.0         56           2
 E glutamate           8.2         76           2
 F phenylalanine       3.1         29           1
 G glycine             6.2         57           2
 H histidine           2.5         23           1
 I isoleucine          7.2         67           2
 K lysine              6.6         61           2
 L leucine             6.7         62           2
 M methionine          1.3         12           2
 N asparagine          4.6         43           2
 P proline             5.9         55           3
 Q glutamine           4.8         44           2
 R arginine            5.3         49           2
 S serine              9.2         85           3
 T threonine           5.3         49           2
 V valine              7.6         70           2
 W tryptophan          0.4          4           2
 Y tyrosine            3.1         29           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   discs, large homolog 1 isoform 2 
DLG1                  0.958   discs, large homolog 1 isoform 1 
DLG2                  0.656   chapsyn-110 isoform 1 
DLG2                  0.646   chapsyn-110 isoform 2 
DLG2                  0.576   chapsyn-110 isoform 3 
DLG4                  0.569   post-synaptic density protein 95 isoform 2 
DLG4                  0.566   post-synaptic density protein 95 isoform 1 
DLG3                  0.558   synapse-associated protein 102 isoform a 
DLG3                  0.397   synapse-associated protein 102 isoform b 
DLG2                  0.280   chapsyn-110 isoform 4 
DLG5                  0.107   discs large homolog 5 
MPP5                  0.097   membrane protein, palmitoylated 5 
MPP7                  0.090   palmitoylated membrane protein 7 
MPP4                  0.079   membrane protein, palmitoylated 4 
MPP3                  0.078   palmitoylated membrane protein 3 
SCRIB                 0.077   scribble isoform b 
SCRIB                 0.077   scribble isoform a 
MPP2                  0.076   palmitoylated membrane protein 2 
MPP6                  0.070   membrane protein, palmitoylated 6 
CASK                  0.069   calcium/calmodulin-dependent serine protein kinase ...
MPP1                  0.067   palmitoylated membrane protein 1 
CASK                  0.066   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.066   calcium/calmodulin-dependent serine protein kinase ...
TJP1                  0.064   tight junction protein 1 isoform b 
TJP1                  0.064   tight junction protein 1 isoform a 
INADL                 0.063   InaD-like 
MPDZ                  0.062   multiple PDZ domain protein 
LNX2                  0.046   ligand of numb-protein X 2 
MAGI3                 0.045   membrane-associated guanylate kinase-related  3 iso...
MAGI3                 0.045   membrane-associated guanylate kinase-related  3 iso...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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