SYNJ2BP 6197

Name: SYNJ2BP	Sequence: fasta or formatted (145aa)		NCBI GI: 157388993
Description: synaptojanin 2 binding protein		Referenced in: PDZ Domain Synapses
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.9 10 3 C cysteine 0.0 0 0 D aspartate 6.2 9 1 E glutamate 4.1 6 3 F phenylalanine 3.4 5 1 G glycine 11.7 17 2 H histidine 2.1 3 1 I isoleucine 5.5 8 1 K lysine 2.1 3 1 L leucine 10.3 15 2 M methionine 2.8 4 1 N asparagine 6.2 9 1 P proline 3.4 5 1 Q glutamine 6.9 10 2 R arginine 6.9 10 1 S serine 4.8 7 1 T threonine 2.8 4 1 V valine 9.7 14 1 W tryptophan 0.7 1 1 Y tyrosine 3.4 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 synaptojanin 2 binding protein DLG4 0.233 post-synaptic density protein 95 isoform 1 DLG4 0.233 post-synaptic density protein 95 isoform 2 DLG1 0.229 discs, large homolog 1 isoform 1 DLG1 0.229 discs, large homolog 1 isoform 2 DLG3 0.229 synapse-associated protein 102 isoform a DLG2 0.229 chapsyn-110 isoform 3 DLG2 0.229 chapsyn-110 isoform 1 DLG2 0.229 chapsyn-110 isoform 2 DLG3 0.184 synapse-associated protein 102 isoform b IL16 0.184 interleukin 16 isoform 2 MPDZ 0.180 multiple PDZ domain protein SCRIB 0.173 scribble isoform b SCRIB 0.173 scribble isoform a INADL 0.158 InaD-like PDZRN3 0.154 PDZ domain containing ring finger 3 PTPN13 0.150 protein tyrosine phosphatase, non-receptor type 13 i... PTPN13 0.150 protein tyrosine phosphatase, non-receptor type 13 i... PTPN13 0.150 protein tyrosine phosphatase, non-receptor type 13 is... MAGI1 0.150 membrane associated guanylate kinase, WW and PDZ dom... PDZD2 0.147 PDZ domain containing 2 LIN7A 0.139 lin-7 homolog A LIN7B 0.139 lin-7 homolog B MAGI1 0.139 membrane associated guanylate kinase, WW and PDZ dom... MAGI1 0.135 membrane associated guanylate kinase, WW and PDZ dom... LIN7C 0.135 lin-7 homolog C MAGI3 0.132 membrane-associated guanylate kinase-related 3 iso... MAGI3 0.132 membrane-associated guanylate kinase-related 3 iso... PARD3B 0.132 par-3 partitioning defective 3 homolog B isoform a ... PARD3B 0.132 par-3 partitioning defective 3 homolog B isoform c ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.