Guide to the Human Genome
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Name: DLG2 Sequence: fasta or formatted (870aa) NCBI GI: 91199538
Description:

chapsyn-110 isoform 2

Referenced in:

PDZ Domain
Synapses

Other entries for this name:
alt prot [334aa] chapsyn-110 isoform 4
alt prot [975aa] chapsyn-110 isoform 1
alt prot [749aa] chapsyn-110 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         45           4
 C cysteine            0.9          8           1
 D aspartate           6.1         53           3
 E glutamate           7.8         68           2
 F phenylalanine       3.3         29           2
 G glycine             7.7         67           2
 H histidine           3.1         27           1
 I isoleucine          6.9         60           2
 K lysine              6.3         55           2
 L leucine             7.7         67           2
 M methionine          2.0         17           2
 N asparagine          3.8         33           2
 P proline             6.0         52           2
 Q glutamine           3.9         34           1
 R arginine            5.9         51           4
 S serine              7.8         68           2
 T threonine           4.6         40           2
 V valine              6.6         57           2
 W tryptophan          0.3          3           2
 Y tyrosine            4.1         36           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chapsyn-110 isoform 2 
DLG2                  0.982   chapsyn-110 isoform 1 
DLG2                  0.762   chapsyn-110 isoform 3 
DLG1                  0.678   discs, large homolog 1 isoform 2 
DLG1                  0.651   discs, large homolog 1 isoform 1 
DLG3                  0.566   synapse-associated protein 102 isoform a 
DLG4                  0.549   post-synaptic density protein 95 isoform 2 
DLG4                  0.543   post-synaptic density protein 95 isoform 1 
DLG3                  0.413   synapse-associated protein 102 isoform b 
DLG2                  0.349   chapsyn-110 isoform 4 
MPP5                  0.109   membrane protein, palmitoylated 5 
MPP7                  0.100   palmitoylated membrane protein 7 
MPP3                  0.091   palmitoylated membrane protein 3 
MPP2                  0.088   palmitoylated membrane protein 2 
DLG5                  0.085   discs large homolog 5 
MPP4                  0.083   membrane protein, palmitoylated 4 
MPP6                  0.082   membrane protein, palmitoylated 6 
CASK                  0.077   calcium/calmodulin-dependent serine protein kinase ...
MPP1                  0.076   palmitoylated membrane protein 1 
TJP3                  0.076   tight junction protein 3 
CASK                  0.073   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.073   calcium/calmodulin-dependent serine protein kinase ...
SCRIB                 0.069   scribble isoform b 
SCRIB                 0.069   scribble isoform a 
MPDZ                  0.066   multiple PDZ domain protein 
TJP1                  0.065   tight junction protein 1 isoform b 
TJP1                  0.065   tight junction protein 1 isoform a 
TJP2                  0.065   tight junction protein 2 (zona occludens 2) isoform ...
TJP2                  0.065   tight junction protein 2 (zona occludens 2) isoform ...
INADL                 0.055   InaD-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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