LNX1 10015

Name: LNX1	Sequence: fasta or formatted (728aa)		NCBI GI: 187607085
Description: ligand of numb-protein X 1 isoform a		Referenced in: PDZ Domain Ring Finger Proteins
Other entries for this name: alt prot [632aa] ligand of numb-protein X 1 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 43 3 C cysteine 3.2 23 1 D aspartate 5.8 42 3 E glutamate 6.2 45 2 F phenylalanine 2.3 17 2 G glycine 7.0 51 2 H histidine 3.3 24 2 I isoleucine 5.9 43 3 K lysine 4.1 30 2 L leucine 9.6 70 2 M methionine 1.2 9 1 N asparagine 4.8 35 2 P proline 6.6 48 2 Q glutamine 3.2 23 1 R arginine 7.3 53 2 S serine 8.7 63 3 T threonine 4.5 33 2 V valine 7.0 51 2 W tryptophan 1.1 8 1 Y tyrosine 2.3 17 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ligand of numb-protein X 1 isoform a LNX1 0.814 ligand of numb-protein X 1 isoform b LNX2 0.423 ligand of numb-protein X 2 MPDZ 0.126 multiple PDZ domain protein INADL 0.088 InaD-like DLG3 0.059 synapse-associated protein 102 isoform a DLG1 0.053 discs, large homolog 1 isoform 1 DLG1 0.053 discs, large homolog 1 isoform 2 SCRIB 0.052 scribble isoform b SCRIB 0.052 scribble isoform a DLG4 0.050 post-synaptic density protein 95 isoform 1 DLG4 0.050 post-synaptic density protein 95 isoform 2 DLG2 0.048 chapsyn-110 isoform 3 FRMPD2 0.046 FERM and PDZ domain containing 2 isoform 1 FRMPD2 0.046 FERM and PDZ domain containing 2 isoform 3 DLG2 0.040 chapsyn-110 isoform 1 DLG2 0.040 chapsyn-110 isoform 2 PDZRN3 0.039 PDZ domain containing ring finger 3 PARD3 0.038 partitioning-defective protein 3 homolog PARD3B 0.038 par-3 partitioning defective 3 homolog B isoform a ... PARD3B 0.038 par-3 partitioning defective 3 homolog B isoform c ... PDZD2 0.037 PDZ domain containing 2 PTPN13 0.035 protein tyrosine phosphatase, non-receptor type 13 is... GRIP2 0.035 glutamate receptor interacting protein 2 PTPN13 0.035 protein tyrosine phosphatase, non-receptor type 13 i... PTPN13 0.034 protein tyrosine phosphatase, non-receptor type 13 i... GRIP1 0.033 glutamate receptor interacting protein 1 MAGI3 0.031 membrane-associated guanylate kinase-related 3 iso... MAGI3 0.031 membrane-associated guanylate kinase-related 3 iso... PTPN13 0.030 protein tyrosine phosphatase, non-receptor type 13 i... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.