PDZD2 36638

Name: PDZD2	Sequence: fasta or formatted (2839aa)		NCBI GI: 87196343
Description: PDZ domain containing 2		Referenced in: PDZ Domain
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 217 3 C cysteine 1.5 44 2 D aspartate 4.6 132 2 E glutamate 6.9 196 3 F phenylalanine 1.6 46 2 G glycine 8.5 242 3 H histidine 2.7 76 1 I isoleucine 3.4 96 2 K lysine 5.7 163 2 L leucine 8.3 236 2 M methionine 1.6 46 1 N asparagine 3.3 94 1 P proline 8.1 229 2 Q glutamine 3.9 111 2 R arginine 5.7 161 2 S serine 13.9 394 5 T threonine 5.2 147 2 V valine 5.7 161 2 W tryptophan 0.6 16 2 Y tyrosine 1.1 32 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PDZ domain containing 2 IL16 0.036 interleukin 16 isoform 2 IL16 0.033 interleukin 16 isoform 1 precursor MPDZ 0.018 multiple PDZ domain protein INADL 0.017 InaD-like PTPN13 0.014 protein tyrosine phosphatase, non-receptor type 13 is... PTPN13 0.013 protein tyrosine phosphatase, non-receptor type 13 i... PTPN13 0.013 protein tyrosine phosphatase, non-receptor type 13 i... PTPN13 0.012 protein tyrosine phosphatase, non-receptor type 13 i... SCRIB 0.011 scribble isoform b SCRIB 0.011 scribble isoform a LNX2 0.010 ligand of numb-protein X 2 DLG4 0.010 post-synaptic density protein 95 isoform 1 DLG4 0.010 post-synaptic density protein 95 isoform 2 DLG2 0.010 chapsyn-110 isoform 3 FRMPD2 0.010 FERM and PDZ domain containing 2 isoform 1 FRMPD2 0.010 FERM and PDZ domain containing 2 isoform 3 DLG1 0.010 discs, large homolog 1 isoform 1 DLG1 0.010 discs, large homolog 1 isoform 2 MUC17 0.010 mucin 17 LNX1 0.010 ligand of numb-protein X 1 isoform a LNX1 0.010 ligand of numb-protein X 1 isoform b MAGI3 0.009 membrane-associated guanylate kinase-related 3 iso... MAGI3 0.009 membrane-associated guanylate kinase-related 3 iso... DLG3 0.009 synapse-associated protein 102 isoform a PARD3B 0.009 par-3 partitioning defective 3 homolog B isoform a ... PARD3B 0.009 par-3 partitioning defective 3 homolog B isoform c ... PARD3 0.009 partitioning-defective protein 3 homolog DLG2 0.009 chapsyn-110 isoform 1 DLG2 0.009 chapsyn-110 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.