PDZRN3 33425

Name: PDZRN3	Sequence: fasta or formatted (1066aa)		NCBI GI: 57529737
Description: PDZ domain containing ring finger 3		Referenced in: PDZ Domain Ring Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 72 3 C cysteine 2.6 28 2 D aspartate 7.4 79 3 E glutamate 8.5 91 2 F phenylalanine 1.9 20 1 G glycine 6.2 66 2 H histidine 3.3 35 2 I isoleucine 4.0 43 2 K lysine 5.8 62 2 L leucine 9.8 105 2 M methionine 2.5 27 2 N asparagine 2.9 31 2 P proline 5.1 54 2 Q glutamine 4.6 49 2 R arginine 7.3 78 4 S serine 8.4 90 3 T threonine 5.2 55 2 V valine 4.4 47 2 W tryptophan 0.6 6 1 Y tyrosine 2.6 28 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PDZ domain containing ring finger 3 PDZRN4 0.423 PDZ domain containing RING finger 4 PDZD4 0.327 PDZ domain containing 4 RNF151 0.037 ring finger protein 151 INADL 0.035 InaD-like RNF41 0.034 ring finger protein 41 isoform 1 RNF41 0.034 ring finger protein 41 isoform 1 SCRIB 0.031 scribble isoform b SCRIB 0.031 scribble isoform a MPDZ 0.031 multiple PDZ domain protein DLG4 0.029 post-synaptic density protein 95 isoform 1 DLG4 0.029 post-synaptic density protein 95 isoform 2 DLG3 0.027 synapse-associated protein 102 isoform a LNX1 0.027 ligand of numb-protein X 1 isoform a DLG2 0.027 chapsyn-110 isoform 3 DLG1 0.026 discs, large homolog 1 isoform 1 DLG1 0.026 discs, large homolog 1 isoform 2 IL16 0.024 interleukin 16 isoform 2 TRAF5 0.024 TNF receptor-associated factor 5 TRAF5 0.024 TNF receptor-associated factor 5 TRAF5 0.024 TNF receptor-associated factor 5 LNX2 0.023 ligand of numb-protein X 2 DLG2 0.023 chapsyn-110 isoform 1 DLG2 0.023 chapsyn-110 isoform 2 DLG3 0.023 synapse-associated protein 102 isoform b DFNB31 0.022 CASK-interacting protein CIP98 isoform 1 TRAF3 0.022 TNF receptor-associated factor 3 isoform 1 TRAF3 0.022 TNF receptor-associated factor 3 isoform 2 TRAF3 0.022 TNF receptor-associated factor 3 isoform 1 PDZD2 0.020 PDZ domain containing 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.