Guide to the Human Genome
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Name: DLG4 Sequence: fasta or formatted (767aa) NCBI GI: 4557529
Description:

post-synaptic density protein 95 isoform 1

Referenced in:

PDZ Domain
Semaphorins
Synapses

Other entries for this name:
alt prot [721aa] post-synaptic density protein 95 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         60           3
 C cysteine            0.5          4           1
 D aspartate           6.6         51           2
 E glutamate           8.0         61           2
 F phenylalanine       3.1         24           1
 G glycine             7.4         57           2
 H histidine           3.1         24           1
 I isoleucine          7.0         54           3
 K lysine              4.8         37           1
 L leucine             8.3         64           2
 M methionine          1.2          9           1
 N asparagine          3.3         25           1
 P proline             5.5         42           2
 Q glutamine           3.4         26           1
 R arginine            6.8         52           2
 S serine              8.2         63           3
 T threonine           4.2         32           2
 V valine              6.1         47           2
 W tryptophan          0.9          7           2
 Y tyrosine            3.7         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   post-synaptic density protein 95 isoform 1 
DLG4                  0.924   post-synaptic density protein 95 isoform 2 
DLG1                  0.687   discs, large homolog 1 isoform 1 
DLG1                  0.681   discs, large homolog 1 isoform 2 
DLG2                  0.631   chapsyn-110 isoform 3 
DLG2                  0.622   chapsyn-110 isoform 2 
DLG2                  0.621   chapsyn-110 isoform 1 
DLG3                  0.618   synapse-associated protein 102 isoform a 
DLG3                  0.374   synapse-associated protein 102 isoform b 
DLG2                  0.279   chapsyn-110 isoform 4 
DLG5                  0.111   discs large homolog 5 
MPP5                  0.109   membrane protein, palmitoylated 5 
MPP7                  0.093   palmitoylated membrane protein 7 
SCRIB                 0.090   scribble isoform b 
SCRIB                 0.090   scribble isoform a 
CASK                  0.086   calcium/calmodulin-dependent serine protein kinase ...
MPP6                  0.084   membrane protein, palmitoylated 6 
CASK                  0.083   calcium/calmodulin-dependent serine protein kinase ...
MPP1                  0.083   palmitoylated membrane protein 1 
MPP2                  0.081   palmitoylated membrane protein 2 
CASK                  0.081   calcium/calmodulin-dependent serine protein kinase ...
MPP3                  0.081   palmitoylated membrane protein 3 
TJP1                  0.075   tight junction protein 1 isoform b 
TJP1                  0.075   tight junction protein 1 isoform a 
INADL                 0.073   InaD-like 
MPDZ                  0.069   multiple PDZ domain protein 
TJP3                  0.068   tight junction protein 3 
TJP2                  0.066   tight junction protein 2 (zona occludens 2) isoform ...
TJP2                  0.066   tight junction protein 2 (zona occludens 2) isoform ...
MPP4                  0.061   membrane protein, palmitoylated 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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