Guide to the Human Genome
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Name: DLG1 Sequence: fasta or formatted (904aa) NCBI GI: 148539628
Description:

discs, large homolog 1 isoform 1

Referenced in:

PDZ Domain
Synapses

Other entries for this name:
alt prot [926aa] discs, large homolog 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         49           4
 C cysteine            0.6          5           1
 D aspartate           6.0         54           2
 E glutamate           8.3         75           2
 F phenylalanine       2.8         25           1
 G glycine             6.5         59           2
 H histidine           2.5         23           1
 I isoleucine          7.5         68           2
 K lysine              6.3         57           2
 L leucine             6.9         62           2
 M methionine          1.4         13           2
 N asparagine          4.4         40           2
 P proline             6.1         55           3
 Q glutamine           4.4         40           2
 R arginine            5.2         47           2
 S serine              9.1         82           3
 T threonine           5.3         48           2
 V valine              7.7         70           2
 W tryptophan          0.4          4           2
 Y tyrosine            3.1         28           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   discs, large homolog 1 isoform 1 
DLG1                  0.981   discs, large homolog 1 isoform 2 
DLG2                  0.646   chapsyn-110 isoform 1 
DLG2                  0.636   chapsyn-110 isoform 2 
DLG2                  0.599   chapsyn-110 isoform 3 
DLG4                  0.590   post-synaptic density protein 95 isoform 2 
DLG4                  0.586   post-synaptic density protein 95 isoform 1 
DLG3                  0.578   synapse-associated protein 102 isoform a 
DLG3                  0.383   synapse-associated protein 102 isoform b 
DLG2                  0.295   chapsyn-110 isoform 4 
DLG5                  0.106   discs large homolog 5 
MPP5                  0.102   membrane protein, palmitoylated 5 
MPP7                  0.091   palmitoylated membrane protein 7 
MPP3                  0.080   palmitoylated membrane protein 3 
MPP2                  0.079   palmitoylated membrane protein 2 
SCRIB                 0.079   scribble isoform b 
SCRIB                 0.079   scribble isoform a 
MPP4                  0.079   membrane protein, palmitoylated 4 
MPP6                  0.075   membrane protein, palmitoylated 6 
CASK                  0.071   calcium/calmodulin-dependent serine protein kinase ...
TJP1                  0.071   tight junction protein 1 isoform b 
TJP1                  0.071   tight junction protein 1 isoform a 
MPP1                  0.070   palmitoylated membrane protein 1 
CASK                  0.069   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.068   calcium/calmodulin-dependent serine protein kinase ...
INADL                 0.064   InaD-like 
MPDZ                  0.064   multiple PDZ domain protein 
TJP3                  0.063   tight junction protein 3 
TJP2                  0.061   tight junction protein 2 (zona occludens 2) isoform ...
TJP2                  0.061   tight junction protein 2 (zona occludens 2) isoform ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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