Guide to the Human Genome
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Name: DLG3 Sequence: fasta or formatted (817aa) NCBI GI: 119943106
Description:

synapse-associated protein 102 isoform a

Referenced in:

PDZ Domain
Synapses

Other entries for this name:
alt prot [512aa] synapse-associated protein 102 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         55           4
 C cysteine            1.2         10           2
 D aspartate           5.8         47           2
 E glutamate           6.7         55           2
 F phenylalanine       2.7         22           1
 G glycine             9.3         76           3
 H histidine           2.8         23           1
 I isoleucine          6.5         53           2
 K lysine              5.5         45           2
 L leucine             7.0         57           2
 M methionine          2.0         16           2
 N asparagine          4.3         35           2
 P proline             6.7         55           3
 Q glutamine           4.2         34           2
 R arginine            6.4         52           3
 S serine              7.2         59           2
 T threonine           3.9         32           2
 V valine              6.5         53           2
 W tryptophan          0.9          7           2
 Y tyrosine            3.8         31           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   synapse-associated protein 102 isoform a 
DLG2                  0.638   chapsyn-110 isoform 3 
DLG1                  0.623   discs, large homolog 1 isoform 1 
DLG1                  0.616   discs, large homolog 1 isoform 2 
DLG2                  0.597   chapsyn-110 isoform 1 
DLG2                  0.597   chapsyn-110 isoform 2 
DLG4                  0.569   post-synaptic density protein 95 isoform 1 
DLG4                  0.568   post-synaptic density protein 95 isoform 2 
DLG3                  0.487   synapse-associated protein 102 isoform b 
DLG2                  0.322   chapsyn-110 isoform 4 
MPP5                  0.107   membrane protein, palmitoylated 5 
MPP7                  0.103   palmitoylated membrane protein 7 
DLG5                  0.102   discs large homolog 5 
MPP3                  0.095   palmitoylated membrane protein 3 
CASK                  0.091   calcium/calmodulin-dependent serine protein kinase ...
MPP6                  0.089   membrane protein, palmitoylated 6 
MPP2                  0.089   palmitoylated membrane protein 2 
CASK                  0.087   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.087   calcium/calmodulin-dependent serine protein kinase ...
MPP1                  0.084   palmitoylated membrane protein 1 
SCRIB                 0.075   scribble isoform b 
SCRIB                 0.075   scribble isoform a 
TJP1                  0.070   tight junction protein 1 isoform b 
TJP1                  0.070   tight junction protein 1 isoform a 
TJP3                  0.066   tight junction protein 3 
MPP4                  0.063   membrane protein, palmitoylated 4 
TJP2                  0.063   tight junction protein 2 (zona occludens 2) isoform ...
TJP2                  0.063   tight junction protein 2 (zona occludens 2) isoform ...
MPDZ                  0.061   multiple PDZ domain protein 
INADL                 0.059   InaD-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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