Guide to the Human Genome
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Name: DLG4 Sequence: fasta or formatted (721aa) NCBI GI: 192447426
Description:

post-synaptic density protein 95 isoform 2

Referenced in:

PDZ Domain
Semaphorins
Synapses

Other entries for this name:
alt prot [767aa] post-synaptic density protein 95 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         54           3
 C cysteine            0.8          6           1
 D aspartate           6.8         49           2
 E glutamate           8.0         58           2
 F phenylalanine       3.2         23           1
 G glycine             7.9         57           2
 H histidine           3.2         23           1
 I isoleucine          7.5         54           3
 K lysine              5.3         38           2
 L leucine             7.1         51           2
 M methionine          1.2          9           1
 N asparagine          3.5         25           1
 P proline             5.0         36           2
 Q glutamine           3.1         22           1
 R arginine            6.7         48           2
 S serine              7.9         57           3
 T threonine           4.6         33           2
 V valine              6.5         47           2
 W tryptophan          0.7          5           2
 Y tyrosine            3.6         26           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   post-synaptic density protein 95 isoform 2 
DLG4                  0.982   post-synaptic density protein 95 isoform 1 
DLG1                  0.734   discs, large homolog 1 isoform 1 
DLG1                  0.728   discs, large homolog 1 isoform 2 
DLG2                  0.671   chapsyn-110 isoform 3 
DLG2                  0.668   chapsyn-110 isoform 2 
DLG2                  0.664   chapsyn-110 isoform 1 
DLG3                  0.655   synapse-associated protein 102 isoform a 
DLG3                  0.398   synapse-associated protein 102 isoform b 
DLG2                  0.297   chapsyn-110 isoform 4 
DLG5                  0.118   discs large homolog 5 
MPP5                  0.115   membrane protein, palmitoylated 5 
MPP7                  0.099   palmitoylated membrane protein 7 
SCRIB                 0.096   scribble isoform b 
SCRIB                 0.096   scribble isoform a 
CASK                  0.091   calcium/calmodulin-dependent serine protein kinase ...
MPP6                  0.089   membrane protein, palmitoylated 6 
CASK                  0.088   calcium/calmodulin-dependent serine protein kinase ...
MPP1                  0.088   palmitoylated membrane protein 1 
MPP2                  0.087   palmitoylated membrane protein 2 
CASK                  0.086   calcium/calmodulin-dependent serine protein kinase ...
MPP3                  0.086   palmitoylated membrane protein 3 
TJP1                  0.080   tight junction protein 1 isoform b 
TJP1                  0.080   tight junction protein 1 isoform a 
INADL                 0.077   InaD-like 
MPDZ                  0.073   multiple PDZ domain protein 
TJP3                  0.072   tight junction protein 3 
TJP2                  0.070   tight junction protein 2 (zona occludens 2) isoform ...
TJP2                  0.070   tight junction protein 2 (zona occludens 2) isoform ...
MPP4                  0.065   membrane protein, palmitoylated 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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