TJP1 1932

Name: TJP1	Sequence: fasta or formatted (1668aa)		NCBI GI: 116875765
Description: tight junction protein 1 isoform b		Referenced in: Gap Junctions and Tight Junctions PDZ Domain
Other entries for this name: alt prot [1748aa] tight junction protein 1 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 105 4 C cysteine 0.4 6 1 D aspartate 6.3 105 2 E glutamate 8.0 133 4 F phenylalanine 2.9 49 1 G glycine 5.3 89 2 H histidine 3.2 54 2 I isoleucine 4.0 67 3 K lysine 6.2 104 3 L leucine 6.2 104 2 M methionine 1.1 18 2 N asparagine 3.9 65 2 P proline 9.7 162 5 Q glutamine 5.1 85 4 R arginine 6.9 115 2 S serine 10.0 166 3 T threonine 4.7 78 3 V valine 5.9 98 2 W tryptophan 0.5 9 1 Y tyrosine 3.4 56 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tight junction protein 1 isoform b TJP1 0.948 tight junction protein 1 isoform a TJP2 0.215 tight junction protein 2 (zona occludens 2) isoform ... TJP2 0.215 tight junction protein 2 (zona occludens 2) isoform ... TJP3 0.189 tight junction protein 3 DLG1 0.037 discs, large homolog 1 isoform 1 DLG5 0.037 discs large homolog 5 DLG1 0.034 discs, large homolog 1 isoform 2 DLG3 0.034 synapse-associated protein 102 isoform a DLG4 0.034 post-synaptic density protein 95 isoform 1 DLG4 0.034 post-synaptic density protein 95 isoform 2 DLG2 0.034 chapsyn-110 isoform 1 DLG2 0.034 chapsyn-110 isoform 2 DLG2 0.032 chapsyn-110 isoform 3 DLG3 0.031 synapse-associated protein 102 isoform b DLG2 0.022 chapsyn-110 isoform 4 INADL 0.018 InaD-like LOC126987 0.017 PREDICTED: similar to hCG2040319 LOC126987 0.017 PREDICTED: similar to hCG2040319 LOC126987 0.017 PREDICTED: similar to hCG2040319 MPP5 0.017 membrane protein, palmitoylated 5 UNC5C 0.016 unc5C PTPN13 0.016 protein tyrosine phosphatase, non-receptor type 13 i... PTPN13 0.016 protein tyrosine phosphatase, non-receptor type 13 i... PTPN13 0.016 protein tyrosine phosphatase, non-receptor type 13 is... SCRIB 0.015 scribble isoform b SCRIB 0.015 scribble isoform a PTPN13 0.015 protein tyrosine phosphatase, non-receptor type 13 i... UNC5B 0.014 unc-5 homolog B MAGI3 0.014 membrane-associated guanylate kinase-related 3 iso... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.