LNX2 23573

Name: LNX2	Sequence: fasta or formatted (690aa)		NCBI GI: 24025688
Description: ligand of numb-protein X 2		Referenced in: PDZ Domain Ring Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 41 2 C cysteine 3.0 21 1 D aspartate 4.6 32 3 E glutamate 6.7 46 2 F phenylalanine 2.2 15 2 G glycine 7.2 50 2 H histidine 4.1 28 2 I isoleucine 5.1 35 2 K lysine 3.9 27 2 L leucine 10.9 75 2 M methionine 1.3 9 1 N asparagine 5.1 35 2 P proline 5.8 40 3 Q glutamine 4.3 30 2 R arginine 5.7 39 2 S serine 8.7 60 4 T threonine 5.8 40 2 V valine 6.5 45 1 W tryptophan 1.0 7 1 Y tyrosine 2.2 15 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ligand of numb-protein X 2 LNX1 0.448 ligand of numb-protein X 1 isoform a LNX1 0.332 ligand of numb-protein X 1 isoform b MPDZ 0.143 multiple PDZ domain protein INADL 0.118 InaD-like DLG2 0.064 chapsyn-110 isoform 3 DLG4 0.062 post-synaptic density protein 95 isoform 2 DLG4 0.061 post-synaptic density protein 95 isoform 1 DLG3 0.061 synapse-associated protein 102 isoform a DLG1 0.060 discs, large homolog 1 isoform 1 DLG1 0.060 discs, large homolog 1 isoform 2 PTPN13 0.048 protein tyrosine phosphatase, non-receptor type 13 i... PTPN13 0.048 protein tyrosine phosphatase, non-receptor type 13 i... PTPN13 0.048 protein tyrosine phosphatase, non-receptor type 13 is... SCRIB 0.048 scribble isoform b SCRIB 0.048 scribble isoform a PTPN13 0.044 protein tyrosine phosphatase, non-receptor type 13 i... PARD3 0.044 partitioning-defective protein 3 homolog FRMPD2 0.044 FERM and PDZ domain containing 2 isoform 1 FRMPD2 0.044 FERM and PDZ domain containing 2 isoform 3 PARD3B 0.043 par-3 partitioning defective 3 homolog B isoform a ... PARD3B 0.043 par-3 partitioning defective 3 homolog B isoform c ... DLG2 0.043 chapsyn-110 isoform 1 DLG2 0.043 chapsyn-110 isoform 2 PDZD2 0.042 PDZ domain containing 2 MAGI1 0.040 membrane associated guanylate kinase, WW and PDZ dom... MAGI3 0.040 membrane-associated guanylate kinase-related 3 iso... MAGI3 0.040 membrane-associated guanylate kinase-related 3 iso... MAGI1 0.039 membrane associated guanylate kinase, WW and PDZ dom... MAGI1 0.039 membrane associated guanylate kinase, WW and PDZ dom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.