Guide to the Human Genome
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Name: DLG5 Sequence: fasta or formatted (1919aa) NCBI GI: 95089461
Description:

discs large homolog 5

Referenced in:

PDZ Domain

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9        133           3
 C cysteine            1.6         30           1
 D aspartate           6.0        115           2
 E glutamate           7.8        150           2
 F phenylalanine       2.3         44           2
 G glycine             5.7        109           2
 H histidine           2.8         53           2
 I isoleucine          4.0         76           2
 K lysine              6.6        127           2
 L leucine            10.3        198           3
 M methionine          1.6         31           1
 N asparagine          2.9         56           2
 P proline             6.3        120           3
 Q glutamine           5.6        108           4
 R arginine            7.0        135           3
 S serine              9.9        190           4
 T threonine           4.4         84           3
 V valine              5.7        109           2
 W tryptophan          0.6         11           1
 Y tyrosine            2.1         40           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   discs large homolog 5 
DLG1                  0.051   discs, large homolog 1 isoform 2 
DLG1                  0.049   discs, large homolog 1 isoform 1 
DLG4                  0.044   post-synaptic density protein 95 isoform 1 
DLG4                  0.044   post-synaptic density protein 95 isoform 2 
DLG3                  0.044   synapse-associated protein 102 isoform a 
DLG2                  0.043   chapsyn-110 isoform 3 
DLG2                  0.039   chapsyn-110 isoform 1 
DLG2                  0.039   chapsyn-110 isoform 2 
DLG3                  0.039   synapse-associated protein 102 isoform b 
TJP1                  0.033   tight junction protein 1 isoform b 
TJP1                  0.033   tight junction protein 1 isoform a 
TJP3                  0.033   tight junction protein 3 
TJP2                  0.030   tight junction protein 2 (zona occludens 2) isoform ...
TJP2                  0.030   tight junction protein 2 (zona occludens 2) isoform ...
DLG2                  0.027   chapsyn-110 isoform 4 
MPP7                  0.021   palmitoylated membrane protein 7 
CGNL1                 0.018   cingulin-like 1 
MYH9                  0.017   myosin, heavy polypeptide 9, non-muscle 
MPP5                  0.016   membrane protein, palmitoylated 5 
MYH3                  0.016   myosin, heavy chain 3, skeletal muscle, embryonic [H...
TCHH                  0.015   trichohyalin 
MYH11                 0.015   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.015   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.015   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.015   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
LOC440243             0.015   PREDICTED: Putative golgin subfamily A member 6-lik...
CGN                   0.015   cingulin 
GOLGB1                0.014   golgi autoantigen, golgin subfamily b, macrogolgin ...
CEP135                0.014   centrosome protein 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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