Guide to the Human Genome
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Name: BATF2 Sequence: fasta or formatted (274aa) NCBI GI: 45238854
Description:

basic leucine zipper transcription factor, ATF-like 2

Referenced in:

Jun / Fos Complexes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         25           3
 C cysteine            2.9          8           1
 D aspartate           3.3          9           1
 E glutamate           4.7         13           1
 F phenylalanine       1.5          4           1
 G glycine             6.9         19           2
 H histidine           4.7         13           1
 I isoleucine          0.4          1           1
 K lysine              4.0         11           2
 L leucine            15.7         43           2
 M methionine          0.7          2           1
 N asparagine          1.5          4           1
 P proline            11.3         31           2
 Q glutamine           9.9         27           2
 R arginine            4.0         11           1
 S serine             11.3         31           3
 T threonine           3.6         10           1
 V valine              2.6          7           2
 W tryptophan          1.5          4           2
 Y tyrosine            0.4          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   basic leucine zipper transcription factor, ATF-like ... 
BATF                  0.096   basic leucine zipper transcription factor, ATF-like [...
BATF3                 0.096   basic leucine zipper transcription factor, ATF-like 3...
ATF7                  0.041   activating transcription factor 7 isoform 3 
ATF7                  0.041   activating transcription factor 7 isoform 2 
ATF7                  0.041   activating transcription factor 7 isoform 1 
FLJ22184              0.037   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.037   PREDICTED: hypothetical protein LOC80164 
CREB5                 0.037   cAMP responsive element binding protein 5 isoform de...
CREB5                 0.037   cAMP responsive element binding protein 5 isoform be...
CREB5                 0.037   cAMP responsive element binding protein 5 isoform ga...
CREB5                 0.037   cAMP responsive element binding protein 5 isoform al...
CREB3L2               0.031   cAMP responsive element binding protein 3-like 2 [Ho...
BAT2                  0.030   HLA-B associated transcript-2 
MLL5                  0.030   myeloid/lymphoid or mixed-lineage leukemia 5 
MLL5                  0.030   myeloid/lymphoid or mixed-lineage leukemia 5 
PRDM2                 0.030   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.030   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.030   retinoblastoma protein-binding zinc finger protein i...
ATF2                  0.028   activating transcription factor 2 
RIN3                  0.028   Ras and Rab interactor 3 
SYNJ1                 0.028   synaptojanin 1 isoform a 
SYNJ1                 0.028   synaptojanin 1 isoform b 
HLF                   0.028   hepatic leukemia factor 
MLL2                  0.026   myeloid/lymphoid or mixed-lineage leukemia 2 
RALGDS                0.026   ral guanine nucleotide dissociation stimulator isofo...
RALGDS                0.026   ral guanine nucleotide dissociation stimulator isof...
SYNJ1                 0.026   synaptojanin 1 isoform c 
FOXP3                 0.026   forkhead box P3 isoform b 
LOC100133142          0.026   PREDICTED: similar to zinc finger protein 208 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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