Guide to the Human Genome
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Name: ATF7 Sequence: fasta or formatted (462aa) NCBI GI: 194239643
Description:

activating transcription factor 7 isoform 3

Referenced in:

CREB / ATF Family

Other entries for this name:
alt prot [494aa] activating transcription factor 7 isoform 1
alt prot [483aa] activating transcription factor 7 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         36           3
 C cysteine            1.3          6           1
 D aspartate           3.2         15           2
 E glutamate           6.3         29           3
 F phenylalanine       1.7          8           1
 G glycine             5.6         26           2
 H histidine           3.0         14           1
 I isoleucine          4.1         19           2
 K lysine              4.8         22           2
 L leucine             8.0         37           3
 M methionine          3.0         14           1
 N asparagine          3.0         14           1
 P proline            11.7         54           2
 Q glutamine           5.8         27           1
 R arginine            5.4         25           4
 S serine             10.4         48           2
 T threonine           7.4         34           1
 V valine              6.7         31           2
 W tryptophan          0.2          1           1
 Y tyrosine            0.4          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   activating transcription factor 7 isoform 3 
ATF7                  0.987   activating transcription factor 7 isoform 2 
ATF7                  0.977   activating transcription factor 7 isoform 1 
ATF2                  0.497   activating transcription factor 2 
CREB5                 0.365   cAMP responsive element binding protein 5 isoform be...
CREB5                 0.365   cAMP responsive element binding protein 5 isoform al...
CREB5                 0.323   cAMP responsive element binding protein 5 isoform ga...
CREB5                 0.217   cAMP responsive element binding protein 5 isoform de...
JUN                   0.058   jun oncogene 
JUND                  0.053   jun D proto-oncogene 
FOSL1                 0.040   FOS-like antigen 1 
FOSL2                 0.039   FOS-like antigen 2 
JUNB                  0.038   jun B proto-oncogene 
RAPH1                 0.036   Ras association and pleckstrin homology domains 1 is...
CREB3L1               0.036   cAMP responsive element binding protein 3-like 1 [Ho...
FOSB                  0.035   FBJ murine osteosarcoma viral oncogene homolog B is...
ATF3                  0.033   activating transcription factor 3 isoform 1 
ATF3                  0.033   activating transcription factor 3 isoform 1 
CEBPB                 0.032   CCAAT/enhancer binding protein beta 
SRCAP                 0.030   Snf2-related CBP activator protein 
JDP2                  0.028   Jun dimerization protein 2 isoform b 
JDP2                  0.028   Jun dimerization protein 2 isoform a 
JDP2                  0.028   Jun dimerization protein 2 isoform a 
JDP2                  0.028   Jun dimerization protein 2 isoform a 
FOS                   0.027   v-fos FBJ murine osteosarcoma viral oncogene homolog ...
BATF3                 0.027   basic leucine zipper transcription factor, ATF-like 3...
FLJ22184              0.027   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.027   PREDICTED: hypothetical protein LOC80164 
ATF6B                 0.027   activating transcription factor 6 beta isoform b [H...
ATF6B                 0.027   activating transcription factor 6 beta isoform a [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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