Guide to the Human Genome
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Name: ATF7 Sequence: fasta or formatted (483aa) NCBI GI: 5802980
Description:

activating transcription factor 7 isoform 2

Referenced in:

CREB / ATF Family

Other entries for this name:
alt prot [494aa] activating transcription factor 7 isoform 1
alt prot [462aa] activating transcription factor 7 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         37           3
 C cysteine            1.4          7           1
 D aspartate           3.5         17           2
 E glutamate           6.2         30           3
 F phenylalanine       1.7          8           1
 G glycine             5.4         26           2
 H histidine           2.9         14           1
 I isoleucine          3.9         19           2
 K lysine              5.0         24           2
 L leucine             7.9         38           3
 M methionine          2.9         14           1
 N asparagine          2.9         14           1
 P proline            12.4         60           2
 Q glutamine           5.6         27           1
 R arginine            5.2         25           4
 S serine             11.2         54           2
 T threonine           7.0         34           1
 V valine              6.6         32           2
 W tryptophan          0.2          1           1
 Y tyrosine            0.4          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   activating transcription factor 7 isoform 2 
ATF7                  0.992   activating transcription factor 7 isoform 1 
ATF7                  0.941   activating transcription factor 7 isoform 3 
ATF2                  0.492   activating transcription factor 2 
CREB5                 0.341   cAMP responsive element binding protein 5 isoform be...
CREB5                 0.341   cAMP responsive element binding protein 5 isoform al...
CREB5                 0.301   cAMP responsive element binding protein 5 isoform ga...
CREB5                 0.207   cAMP responsive element binding protein 5 isoform de...
JUN                   0.055   jun oncogene 
JUND                  0.051   jun D proto-oncogene 
FOSL1                 0.038   FOS-like antigen 1 
RAPH1                 0.038   Ras association and pleckstrin homology domains 1 is...
FLJ22184              0.037   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.037   PREDICTED: hypothetical protein LOC80164 
FOSL2                 0.037   FOS-like antigen 2 
FLJ22184              0.036   PREDICTED: hypothetical protein FLJ22184 
JUNB                  0.036   jun B proto-oncogene 
CREB3L1               0.035   cAMP responsive element binding protein 3-like 1 [Ho...
BCL9L                 0.034   B-cell CLL/lymphoma 9-like 
FOSB                  0.033   FBJ murine osteosarcoma viral oncogene homolog B is...
ATF3                  0.032   activating transcription factor 3 isoform 1 
ATF3                  0.032   activating transcription factor 3 isoform 1 
CEBPB                 0.031   CCAAT/enhancer binding protein beta 
WNK4                  0.030   WNK lysine deficient protein kinase 4 
SRCAP                 0.030   Snf2-related CBP activator protein 
RREB1                 0.028   ras responsive element binding protein 1 isoform 2 [...
RREB1                 0.028   ras responsive element binding protein 1 isoform 1 [...
ATF6B                 0.028   activating transcription factor 6 beta isoform b [H...
ATF6B                 0.028   activating transcription factor 6 beta isoform a [Ho...
MLL2                  0.027   myeloid/lymphoid or mixed-lineage leukemia 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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