PRDM2 32966

Name: PRDM2	Sequence: fasta or formatted (1481aa)		NCBI GI: 55953110
Description: retinoblastoma protein-binding zinc finger protein isoform c		Referenced in: RB1 and Related Functions Kruppel-related Zinc Finger Proteins
Other entries for this name: alt prot [1718aa] retinoblastoma protein-binding zinc finger protein isoform a alt prot [1682aa] retinoblastoma protein-binding zinc finger protein isoform b alt prot [226aa] retinoblastoma protein-binding zinc finger protein isoform d
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 95 4 C cysteine 2.6 38 1 D aspartate 4.6 68 5 E glutamate 8.7 129 9 F phenylalanine 2.8 41 1 G glycine 4.1 60 2 H histidine 2.9 43 2 I isoleucine 3.0 44 1 K lysine 8.5 126 3 L leucine 7.5 111 2 M methionine 1.6 24 1 N asparagine 4.2 62 3 P proline 9.6 142 4 Q glutamine 4.2 62 2 R arginine 3.9 58 3 S serine 13.0 192 12 T threonine 5.8 86 2 V valine 5.3 78 3 W tryptophan 0.4 6 1 Y tyrosine 1.1 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 retinoblastoma protein-binding zinc finger protein i... PRDM2 1.000 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.997 retinoblastoma protein-binding zinc finger protein i... MUC2 0.020 mucin 2 precursor SALL1 0.019 sal-like 1 isoform b SALL1 0.019 sal-like 1 isoform a BCL6B 0.018 B-cell CLL/lymphoma 6, member B (zinc finger protein... ATN1 0.018 atrophin-1 ATN1 0.018 atrophin-1 WASF2 0.018 WAS protein family, member 2 ZNF362 0.018 zinc finger protein 362 FLJ22184 0.018 PREDICTED: hypothetical protein LOC80164 ZNF384 0.017 nuclear matrix transcription factor 4 isoform d [Ho... FLJ22184 0.017 PREDICTED: hypothetical protein FLJ22184 FMN2 0.017 formin 2 ZBTB17 0.017 zinc finger and BTB domain containing 17 ZNF454 0.017 zinc finger protein 454 PRG4 0.017 proteoglycan 4 isoform D PRG4 0.017 proteoglycan 4 isoform C PRG4 0.017 proteoglycan 4 isoform B PRG4 0.017 proteoglycan 4 isoform A FLJ22184 0.016 PREDICTED: hypothetical protein FLJ22184 PRDM1 0.016 PR domain containing 1, with ZNF domain isoform 1 [... PRDM1 0.016 PR domain containing 1, with ZNF domain isoform 2 [H... ZNF840 0.016 PREDICTED: zinc finger protein 840 ZNF840 0.016 PREDICTED: zinc finger protein 840 ZNF840 0.016 PREDICTED: zinc finger protein 840 WIPF3 0.016 WAS/WASL interacting protein family, member 3 [Homo... KIAA1522 0.016 hypothetical protein LOC57648 ZNF384 0.016 nuclear matrix transcription factor 4 isoform b [Hom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.